Detailed information NTG1104819

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACN08T_RS04645
• Genome accession: NZ_CP183248
• Coordinates: 925848..926900 (-)
• Length: 350 a.a.
• NCBI ID: WP_008988027.1
• Uniprot ID: A0A0M9FBM1
• Organism: Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 920848..931900

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACN08T_RS04635 (ACN08T_04635)	alaS	921522..924146 (-)	2625	WP_045069289.1	alanine--tRNA ligase	-
ACN08T_RS04640 (ACN08T_04640)	kch	924437..925666 (-)	1230	WP_419205269.1	voltage-gated potassium channel protein	-
ACN08T_RS04645 (ACN08T_04645)	recA	925848..926900 (-)	1053	WP_008988027.1	recombinase RecA	Machinery gene
ACN08T_RS04650 (ACN08T_04650)	pncC	927026..927517 (-)	492	WP_008988026.1	nicotinamide-nucleotide amidase	-
ACN08T_RS04655 (ACN08T_04655)	mutS	927750..930329 (+)	2580	WP_419205270.1	DNA mismatch repair protein MutS	-
ACN08T_RS04660 (ACN08T_04660)	rpoS	930440..931441 (-)	1002	WP_008988024.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37689.04 Da
• Isoelectric Point: 4.8081

>NTDB_id=1104819 ACN08T_RS04645 WP_008988027.1 925848..926900(-) (recA) [Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a]
MDDNKQKALAAALGQIEKQFGKGSIMKLGDNRTMDIETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLETIA
AAQRKGKTCAFIDAEHALDPIYAQKLGVDIDQLLVSQPDTGEQALEICDALARSGAVDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRIKVVKNKIAAPFKQADTQILYGQGFNRNGELVDLGVKHKLVEKAGAWYSYKGDKIGQGKANACKFLTENPETAAEIEA
KLRELLLSPVTEGETSEAQDNMDIEEDEAF

Nucleotide

• Length: 1053 bp

>NTDB_id=1104819 ACN08T_RS04645 WP_008988027.1 925848..926900(-) (recA) [Photobacterium leiognathi subsp. mandapamensis strain Sc9.10a]
ATGGACGACAACAAACAAAAGGCTCTTGCCGCAGCGTTAGGCCAGATTGAGAAGCAGTTCGGTAAAGGTTCAATCATGAA
GTTGGGCGATAACCGTACTATGGATATCGAAACAATTTCAACCGGCTCCCTATCTTTAGATATTGCACTGGGTGCTGGTG
GCTTACCAATGGGTCGTATCGTAGAAATCTACGGTCCTGAATCTTCAGGTAAAACAACTTTAACACTTGAAACGATTGCA
GCAGCTCAGCGTAAAGGAAAAACCTGTGCTTTCATCGATGCTGAACACGCACTGGATCCTATTTACGCACAAAAGCTGGG
TGTAGATATCGATCAGCTTTTAGTTTCTCAGCCAGATACAGGTGAGCAAGCACTAGAAATTTGTGATGCATTAGCACGTT
CTGGTGCCGTTGATCTTATCGTTGTTGACTCCGTTGCCGCACTAACACCTAAAGCTGAAATCGAAGGTGAAATGGGTGAC
TCACACATGGGTCTACAAGCACGTATGCTTTCTCAAGCAATGCGTAAGCTAACAGGTAACCTAAAGCAGTCTAACTGTAT
GTGTATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTTGGTAACCCAGAAACCACTACTGGTGGTAACGCAC
TGAAGTTCTACGCATCTGTTCGTCTTGATATTCGTCGTACTGGCGCTATCAAAGAAGGTGACGAAGTTGTTGGTAACGAA
ACACGCATTAAAGTAGTTAAGAACAAGATTGCCGCACCATTTAAGCAAGCTGATACACAGATCCTATACGGTCAAGGCTT
TAACCGTAACGGTGAGCTAGTTGACCTAGGTGTTAAGCACAAGCTGGTAGAAAAAGCAGGTGCTTGGTACAGCTACAAGG
GCGATAAGATCGGCCAAGGTAAAGCAAATGCGTGTAAGTTCTTAACTGAGAATCCAGAAACAGCAGCAGAGATCGAAGCG
AAGTTACGTGAGCTATTACTTAGCCCTGTAACGGAAGGCGAAACATCTGAAGCGCAAGACAATATGGATATCGAAGAAGA
CGAAGCATTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A0M9FBM1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	87.32	99.143	0.866
recA	Vibrio cholerae O1 biovar El Tor strain E7946	87.32	99.143	0.866
recA	Pseudomonas stutzeri DSM 10701	74.128	98.286	0.729
recA	Acinetobacter baylyi ADP1	72.334	99.143	0.717
recA	Acinetobacter baumannii D1279779	74.174	95.143	0.706
recA	Glaesserella parasuis strain SC1401	68.3	99.143	0.677
recA	Neisseria gonorrhoeae MS11	66.382	100	0.666
recA	Neisseria gonorrhoeae MS11	66.382	100	0.666
recA	Neisseria gonorrhoeae strain FA1090	66.382	100	0.666
recA	Ralstonia pseudosolanacearum GMI1000	72.347	88.857	0.643
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.988	97.714	0.606
recA	Streptococcus mutans UA159	58.857	100	0.589
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.329	94.571	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	62.928	91.714	0.577
recA	Streptococcus pneumoniae TIGR4	61.61	92.286	0.569
recA	Streptococcus pneumoniae Rx1	61.61	92.286	0.569
recA	Streptococcus mitis SK321	61.61	92.286	0.569
recA	Streptococcus pneumoniae R6	61.61	92.286	0.569
recA	Streptococcus pneumoniae D39	61.61	92.286	0.569
recA	Helicobacter pylori strain NCTC11637	60.923	92.857	0.566
recA	Streptococcus mitis NCTC 12261	61.3	92.286	0.566
recA	Helicobacter pylori 26695	60.615	92.857	0.563
recA	Streptococcus pyogenes NZ131	60.308	92.857	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.091	94.286	0.557
recA	Latilactobacillus sakei subsp. sakei 23K	60.125	91.714	0.551
recA	Lactococcus lactis subsp. cremoris KW2	58.514	92.286	0.54