Detailed information NTG1099933

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACNFWN_RS04910
• Genome accession: NZ_CP181387
• Coordinates: 1026001..1027047 (+)
• Length: 348 a.a.
• NCBI ID: WP_132648805.1
• Uniprot ID: A0A4R2MMA0
• Organism: Rubrivivax gelatinosus isolate AJ1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1021001..1032047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNFWN_RS04895	rodA	1022332..1023492 (+)	1161	WP_132648807.1	rod shape-determining protein RodA	-
ACNFWN_RS04900	-	1023580..1025052 (-)	1473	WP_132648806.1	sensor histidine kinase	-
ACNFWN_RS04905	-	1025157..1025828 (-)	672	WP_009857919.1	response regulator transcription factor	-
ACNFWN_RS04910	recA	1026001..1027047 (+)	1047	WP_132648805.1	recombinase RecA	Machinery gene
ACNFWN_RS04915	recX	1027131..1027625 (+)	495	WP_132648804.1	recombination regulator RecX	-
ACNFWN_RS04920	-	1027750..1028328 (+)	579	WP_132648803.1	DUF2889 domain-containing protein	-
ACNFWN_RS04925	sucC	1028325..1029485 (+)	1161	WP_416461494.1	ADP-forming succinate--CoA ligase subunit beta	-
ACNFWN_RS04930	sucD	1029612..1030505 (+)	894	WP_416461094.1	succinate--CoA ligase subunit alpha	-
ACNFWN_RS04935	-	1030553..1031386 (+)	834	WP_132649614.1	EamA family transporter	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37247.70 Da
• Isoelectric Point: 4.9490

>NTDB_id=1099933 ACNFWN_RS04910 WP_132648805.1 1026001..1027047(+) (recA) [Rubrivivax gelatinosus isolate AJ1]
MDAPKPLNAEKAKALQAALAQIEKQFGKGSIMRLGEGEVIEDIQVVSTGSLGLDVALGVGGLPRGRVVEIYGPESSGKTT
LTLQVIAEMQKTGGTCAFIDAEHALDIQYAQKLGVNLQDLLISQPDTGEQALEIVDALVRSGSIDLIVVDSVAALTPKAE
IEGEMGDSLPGLQARLMSQALRKLTATIKKTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGNIKKG
DEVIGSETKVKVVKNKVSPPFKTAEFDILYGEGISREGEIIDMGVNARLVEKSGAWYAYNGEKIGQGKDNAREFLRENPD
IARDIENKVRDSLGIPQLPPADGAEAGA

Nucleotide

• Length: 1047 bp

>NTDB_id=1099933 ACNFWN_RS04910 WP_132648805.1 1026001..1027047(+) (recA) [Rubrivivax gelatinosus isolate AJ1]
ATGGATGCCCCGAAACCGCTGAACGCCGAGAAAGCCAAGGCCCTGCAGGCCGCTCTTGCCCAGATCGAGAAACAGTTCGG
CAAGGGCTCGATCATGCGCCTGGGCGAAGGCGAGGTGATCGAGGACATCCAGGTCGTGTCCACTGGCTCGCTGGGCCTGG
ACGTCGCGCTCGGTGTCGGCGGTCTGCCGCGTGGCCGCGTCGTCGAGATCTACGGCCCTGAATCGTCGGGCAAGACGACG
CTGACGCTGCAGGTCATCGCCGAGATGCAGAAGACCGGCGGCACCTGCGCTTTCATCGACGCCGAACACGCGCTGGACAT
CCAGTACGCGCAGAAGCTGGGCGTCAACCTGCAGGACCTGCTGATCAGCCAGCCCGACACCGGCGAGCAGGCGCTGGAGA
TCGTCGACGCGCTGGTGCGTTCGGGCTCGATCGACCTGATCGTCGTCGACTCGGTCGCCGCGCTGACGCCCAAGGCCGAA
ATCGAAGGCGAGATGGGCGACTCGCTGCCCGGCCTGCAGGCGCGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCGAC
GATCAAGAAGACCAACACGATGGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACCCCGAAA
CGACCACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCACCGGCAACATCAAGAAGGGC
GACGAGGTCATCGGCAGCGAGACCAAGGTCAAGGTCGTCAAGAACAAGGTCTCGCCGCCGTTCAAGACCGCCGAGTTCGA
CATCCTTTACGGCGAAGGCATCAGCCGCGAAGGCGAGATCATCGACATGGGTGTGAACGCGCGCCTCGTCGAGAAGTCCG
GTGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCAAGGACAACGCACGCGAGTTCCTGCGCGAGAACCCCGAC
ATCGCGCGCGACATCGAGAACAAGGTGCGTGATTCGCTGGGCATCCCGCAACTGCCTCCCGCAGACGGCGCCGAAGCCGG
CGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (13-275)

3D structure

• AlphaFold DB: A0A4R2MMA0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.587	94.54	0.79
recA	Pseudomonas stutzeri DSM 10701	72.783	93.966	0.684
recA	Glaesserella parasuis strain SC1401	73.148	93.103	0.681
recA	Neisseria gonorrhoeae strain FA1090	72.84	93.103	0.678
recA	Neisseria gonorrhoeae MS11	72.84	93.103	0.678
recA	Neisseria gonorrhoeae MS11	72.84	93.103	0.678
recA	Acinetobacter baylyi ADP1	71.56	93.966	0.672
recA	Vibrio cholerae strain A1552	70.695	95.115	0.672
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.695	95.115	0.672
recA	Acinetobacter baumannii D1279779	70.948	93.966	0.667
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.061	94.828	0.626
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.559	95.115	0.624
recA	Bacillus subtilis subsp. subtilis str. 168	65.749	93.966	0.618
recA	Helicobacter pylori strain NCTC11637	63.83	94.54	0.603
recA	Helicobacter pylori 26695	63.83	94.54	0.603
recA	Latilactobacillus sakei subsp. sakei 23K	63.063	95.69	0.603
recA	Streptococcus mutans UA159	61.493	96.264	0.592
recA	Streptococcus mitis SK321	59.538	99.425	0.592
recA	Streptococcus pneumoniae D39	60.896	96.264	0.586
recA	Streptococcus pneumoniae TIGR4	60.896	96.264	0.586
recA	Streptococcus pneumoniae Rx1	60.896	96.264	0.586
recA	Streptococcus pneumoniae R6	60.896	96.264	0.586
recA	Streptococcus mitis NCTC 12261	60.597	96.264	0.583
recA	Lactococcus lactis subsp. cremoris KW2	60.059	97.126	0.583
recA	Streptococcus pyogenes NZ131	60.778	95.977	0.583
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.479	95.977	0.58