Detailed information NTG1096566

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACMXYR_RS13860
• Genome accession: NZ_CP180556
• Coordinates: 2914770..2915813 (-)
• Length: 347 a.a.
• NCBI ID: WP_415902037.1
• Uniprot ID: -
• Organism: Neptuniibacter sp. QD29_5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2909770..2920813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYR_RS13840 (ACMXYR_13840)	csrA	2909797..2909985 (-)	189	WP_415882418.1	carbon storage regulator CsrA	-
ACMXYR_RS13845 (ACMXYR_13845)	-	2910136..2911371 (-)	1236	WP_415902035.1	aspartate kinase	-
ACMXYR_RS13850 (ACMXYR_13850)	alaS	2911388..2913943 (-)	2556	WP_415903657.1	alanine--tRNA ligase	-
ACMXYR_RS13855 (ACMXYR_13855)	-	2914237..2914701 (-)	465	WP_415902036.1	regulatory protein RecX	-
ACMXYR_RS13860 (ACMXYR_13860)	recA	2914770..2915813 (-)	1044	WP_415902037.1	recombinase RecA	Machinery gene
ACMXYR_RS13865 (ACMXYR_13865)	pncC	2915919..2916395 (-)	477	WP_415902038.1	nicotinamide-nucleotide amidase	-
ACMXYR_RS13870 (ACMXYR_13870)	mutS	2916505..2919069 (+)	2565	WP_415902039.1	DNA mismatch repair protein MutS	-
ACMXYR_RS13875 (ACMXYR_13875)	rpoS	2919128..2920144 (-)	1017	WP_415902040.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37382.60 Da
• Isoelectric Point: 4.8723

>NTDB_id=1096566 ACMXYR_RS13860 WP_415902037.1 2914770..2915813(-) (recA) [Neptuniibacter sp. QD29_5]
MDANRKKALDAALGQIERQFGKGAVMRMGDQPREAIPSVSTGSLGLDIALGIGGLPYGRIVEIYGPESSGKTTLTLQVVA
EAQKQGKTCAFVDAEHALDPIYAEKLGVDVDSLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALTPKAEIEGDMGD
SHVGLQARLMSQALRKLTGNVKSSNCLLVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGAVKKGDEVVGNE
TRVKVVKNKVSPPFRQAEFQIMYGEGIYHMGEVIDLGVKEGLVDKSGAWYAYNGDKIGQGKANASKFLEENPEIANEIET
ELRNRLLSTPAPKEDGAEDKTESLDLI

Nucleotide

• Length: 1044 bp

>NTDB_id=1096566 ACMXYR_RS13860 WP_415902037.1 2914770..2915813(-) (recA) [Neptuniibacter sp. QD29_5]
ATGGACGCAAATCGCAAAAAAGCATTAGACGCAGCGTTAGGTCAAATTGAAAGGCAGTTTGGTAAAGGCGCAGTGATGCG
TATGGGGGATCAGCCTCGTGAAGCGATTCCATCTGTTTCTACTGGTTCCCTTGGTCTAGATATCGCGCTTGGCATAGGCG
GATTGCCGTATGGCCGTATCGTTGAGATCTATGGTCCTGAATCATCTGGTAAAACAACACTGACATTACAGGTTGTTGCT
GAAGCTCAGAAACAGGGTAAAACTTGTGCCTTTGTTGATGCTGAGCATGCACTAGATCCTATCTATGCAGAGAAGCTAGG
TGTTGATGTAGATAGCCTGTTGGTTTCACAGCCAGATACAGGTGAGCAGGCGCTAGAAATTACAGATATGCTAGTTCGTT
CTAACGCAGTTGATGTAATTATCGTCGACTCTGTAGCTGCTTTGACCCCGAAGGCAGAAATTGAAGGTGATATGGGTGAT
TCCCATGTTGGTCTTCAGGCTCGTTTGATGTCTCAGGCGCTACGTAAGTTGACGGGTAATGTTAAGAGTTCTAACTGCTT
ATTAGTATTCATTAACCAGATTCGTATGAAGATTGGGGTTATGTTTGGTAATCCTGAGACGACTACAGGTGGTAATGCGC
TTAAATTCTACTCATCTGTTCGTTTGGATATTCGCCGTACTGGTGCAGTCAAGAAAGGTGATGAGGTAGTTGGTAACGAG
ACGCGTGTGAAGGTTGTTAAGAACAAAGTTTCACCGCCGTTCCGTCAGGCTGAGTTCCAGATTATGTATGGTGAAGGTAT
CTACCATATGGGCGAAGTTATCGACCTAGGTGTTAAAGAAGGTTTGGTTGATAAGTCGGGTGCTTGGTATGCCTACAATG
GCGATAAGATTGGTCAAGGTAAGGCCAATGCATCTAAGTTCTTGGAAGAAAACCCTGAGATTGCGAATGAAATCGAAACA
GAACTTCGTAATCGCTTGCTTTCGACGCCTGCACCGAAAGAAGATGGTGCTGAAGATAAAACTGAAAGTCTTGATCTGAT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	83.384	95.389	0.795
recA	Vibrio cholerae strain A1552	74.695	94.524	0.706
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.695	94.524	0.706
recA	Acinetobacter baylyi ADP1	71.637	98.559	0.706
recA	Glaesserella parasuis strain SC1401	74.233	93.948	0.697
recA	Acinetobacter baumannii D1279779	70.468	98.559	0.695
recA	Neisseria gonorrhoeae MS11	72.84	93.372	0.68
recA	Neisseria gonorrhoeae MS11	72.84	93.372	0.68
recA	Neisseria gonorrhoeae strain FA1090	72.84	93.372	0.68
recA	Ralstonia pseudosolanacearum GMI1000	73.016	90.778	0.663
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.749	94.236	0.62
recA	Helicobacter pylori strain NCTC11637	61.652	97.695	0.602
recA	Helicobacter pylori 26695	61.652	97.695	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	64.174	92.507	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.145	95.677	0.585
recA	Streptococcus mutans UA159	58.601	98.847	0.579
recA	Latilactobacillus sakei subsp. sakei 23K	57.143	98.847	0.565
recA	Streptococcus pneumoniae Rx1	58.537	94.524	0.553
recA	Streptococcus pneumoniae D39	58.537	94.524	0.553
recA	Streptococcus pneumoniae R6	58.537	94.524	0.553
recA	Streptococcus pneumoniae TIGR4	58.537	94.524	0.553
recA	Streptococcus mitis NCTC 12261	58.769	93.66	0.55
recA	Streptococcus mitis SK321	58.462	93.66	0.548
recA	Streptococcus pyogenes NZ131	58.282	93.948	0.548
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.231	93.66	0.536
recA	Lactococcus lactis subsp. cremoris KW2	56.615	93.66	0.53