Detailed information NTG1096520

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACMXYT_RS14215
• Genome accession: NZ_CP180552
• Coordinates: 3034493..3035536 (-)
• Length: 347 a.a.
• NCBI ID: WP_415882421.1
• Uniprot ID: -
• Organism: Neptuniibacter sp. QD37_11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3029493..3040536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMXYT_RS14195 (ACMXYT_14195)	csrA	3029520..3029708 (-)	189	WP_415882418.1	carbon storage regulator CsrA	-
ACMXYT_RS14200 (ACMXYT_14200)	-	3029859..3031094 (-)	1236	WP_415899197.1	aspartate kinase	-
ACMXYT_RS14205 (ACMXYT_14205)	alaS	3031111..3033666 (-)	2556	WP_415912204.1	alanine--tRNA ligase	-
ACMXYT_RS14210 (ACMXYT_14210)	-	3033960..3034424 (-)	465	WP_415911601.1	regulatory protein RecX	-
ACMXYT_RS14215 (ACMXYT_14215)	recA	3034493..3035536 (-)	1044	WP_415882421.1	recombinase RecA	Machinery gene
ACMXYT_RS14220 (ACMXYT_14220)	pncC	3035642..3036118 (-)	477	WP_415911602.1	nicotinamide-nucleotide amidase	-
ACMXYT_RS14225 (ACMXYT_14225)	mutS	3036228..3038792 (+)	2565	WP_415911603.1	DNA mismatch repair protein MutS	-
ACMXYT_RS14230 (ACMXYT_14230)	rpoS	3038851..3039867 (-)	1017	WP_415899201.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37440.64 Da
• Isoelectric Point: 4.8043

>NTDB_id=1096520 ACMXYT_RS14215 WP_415882421.1 3034493..3035536(-) (recA) [Neptuniibacter sp. QD37_11]
MDANRKKALDAALGQIERQFGKGAVMRMGDQPREAIPSVSTGSLGLDIALGIGGLPYGRIVEIYGPESSGKTTLTLQVVA
EAQKQGKTCAFVDAEHALDPIYAEKLGVDVDSLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALTPKAEIEGDMGD
SHVGLQARLMSQALRKLTGNVKSSNCLLVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGAVKKGDEVVGNE
TRVKVVKNKVSPPFRQAEFQIMYGEGIYHMGEVIDLGVKEGLVDKSGAWYAYNGDKIGQGKANASKFLEENPEIANEIET
ELRNRLLSTPAPKEDDAEDKTESLDLI

Nucleotide

• Length: 1044 bp

>NTDB_id=1096520 ACMXYT_RS14215 WP_415882421.1 3034493..3035536(-) (recA) [Neptuniibacter sp. QD37_11]
ATGGACGCAAATCGCAAAAAAGCATTAGACGCAGCGTTAGGTCAAATTGAAAGGCAGTTTGGTAAAGGCGCAGTGATGCG
TATGGGGGATCAGCCTCGTGAAGCGATTCCATCTGTTTCTACTGGGTCTCTAGGTCTGGATATCGCGCTTGGTATAGGCG
GATTGCCGTATGGTCGTATCGTTGAAATTTATGGTCCTGAGTCATCTGGTAAAACAACTCTGACATTACAGGTTGTAGCG
GAAGCTCAGAAGCAGGGTAAAACCTGTGCCTTTGTTGATGCTGAGCATGCGCTAGATCCTATTTATGCAGAGAAGCTAGG
CGTTGATGTAGATAGTCTTCTGGTTTCACAGCCGGATACAGGTGAGCAGGCGCTAGAAATTACAGATATGCTAGTTCGCT
CTAACGCAGTTGATGTAATCATCGTCGACTCTGTAGCTGCTTTGACGCCGAAGGCAGAGATCGAAGGTGATATGGGTGAT
TCCCATGTTGGTCTTCAGGCTCGTTTGATGTCTCAGGCGCTACGTAAGTTGACGGGTAATGTTAAGAGCTCTAACTGCTT
GTTGGTATTCATTAACCAGATTCGTATGAAGATTGGGGTTATGTTTGGTAATCCTGAGACAACTACCGGTGGTAACGCGC
TTAAATTCTACTCATCTGTTCGTTTGGATATTCGCCGAACTGGTGCAGTTAAGAAAGGTGATGAGGTCGTTGGTAACGAG
ACGCGTGTGAAGGTTGTTAAGAACAAAGTTTCACCGCCGTTCCGTCAGGCTGAGTTCCAGATTATGTATGGTGAAGGTAT
CTACCATATGGGCGAAGTTATTGATCTAGGTGTTAAAGAGGGCTTAGTTGATAAATCGGGTGCTTGGTATGCTTACAATG
GCGATAAGATTGGGCAAGGTAAGGCCAATGCATCTAAGTTCTTGGAAGAGAATCCTGAGATTGCGAATGAAATCGAAACA
GAACTTCGTAATCGCTTGCTTTCGACACCTGCACCGAAAGAAGACGATGCTGAAGATAAAACTGAAAGCCTTGATCTGAT
TTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	83.384	95.389	0.795
recA	Vibrio cholerae strain A1552	74.695	94.524	0.706
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.695	94.524	0.706
recA	Acinetobacter baylyi ADP1	71.637	98.559	0.706
recA	Glaesserella parasuis strain SC1401	74.233	93.948	0.697
recA	Acinetobacter baumannii D1279779	70.468	98.559	0.695
recA	Neisseria gonorrhoeae MS11	72.84	93.372	0.68
recA	Neisseria gonorrhoeae MS11	72.84	93.372	0.68
recA	Neisseria gonorrhoeae strain FA1090	72.84	93.372	0.68
recA	Ralstonia pseudosolanacearum GMI1000	73.016	90.778	0.663
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.749	94.236	0.62
recA	Helicobacter pylori strain NCTC11637	61.652	97.695	0.602
recA	Helicobacter pylori 26695	61.652	97.695	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	64.174	92.507	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.145	95.677	0.585
recA	Streptococcus mutans UA159	58.601	98.847	0.579
recA	Streptococcus pneumoniae Rx1	56.936	99.712	0.568
recA	Streptococcus pneumoniae D39	56.936	99.712	0.568
recA	Streptococcus pneumoniae R6	56.936	99.712	0.568
recA	Streptococcus pneumoniae TIGR4	56.936	99.712	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	57.143	98.847	0.565
recA	Streptococcus mitis NCTC 12261	58.769	93.66	0.55
recA	Streptococcus mitis SK321	58.462	93.66	0.548
recA	Streptococcus pyogenes NZ131	58.282	93.948	0.548
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.231	93.66	0.536
recA	Lactococcus lactis subsp. cremoris KW2	56.615	93.66	0.53