Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   ACLBK7_RS01800 Genome accession   NZ_CP180234
Coordinates   301936..303012 (+) Length   358 a.a.
NCBI ID   WP_000741567.1    Uniprot ID   A0A9W5QLX7
Organism   Bacillus cereus strain Ba 4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Related MGE


Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 251764..304066 301936..303012 within 0


Gene organization within MGE regions


Location: 251764..304066
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLBK7_RS01480 (ACLBK7_01480) - 251764..253689 (-) 1926 WP_000602145.1 ABC-F family ATP-binding cassette domain-containing protein -
  ACLBK7_RS01485 (ACLBK7_01485) - 253877..254506 (+) 630 WP_000372699.1 redox-sensing transcriptional repressor Rex -
  ACLBK7_RS01490 (ACLBK7_01490) - 254536..254727 (-) 192 WP_001246200.1 YdiK family protein -
  ACLBK7_RS01495 (ACLBK7_01495) - 254724..255473 (-) 750 WP_000745326.1 CPBP family intramembrane glutamic endopeptidase -
  ACLBK7_RS01500 (ACLBK7_01500) groES 255865..256149 (+) 285 WP_000917311.1 co-chaperone GroES -
  ACLBK7_RS01505 (ACLBK7_01505) groL 256188..257822 (+) 1635 WP_001029993.1 chaperonin GroEL -
  ACLBK7_RS01510 (ACLBK7_01510) guaA 258229..259767 (+) 1539 WP_000743906.1 glutamine-hydrolyzing GMP synthase -
  ACLBK7_RS01515 (ACLBK7_01515) - 259833..260900 (-) 1068 WP_001123356.1 tyrosine-type recombinase/integrase -
  ACLBK7_RS01520 (ACLBK7_01520) - 260927..261367 (-) 441 WP_000654304.1 ImmA/IrrE family metallo-endopeptidase -
  ACLBK7_RS01525 (ACLBK7_01525) - 261381..261860 (-) 480 WP_000435973.1 helix-turn-helix domain-containing protein -
  ACLBK7_RS01530 (ACLBK7_01530) - 262046..262300 (+) 255 WP_001042666.1 DUF739 family protein -
  ACLBK7_RS01535 (ACLBK7_01535) - 262314..262502 (+) 189 WP_000383685.1 hypothetical protein -
  ACLBK7_RS01540 (ACLBK7_01540) - 262556..262711 (+) 156 WP_000788380.1 DUF6906 family protein -
  ACLBK7_RS01545 (ACLBK7_01545) - 262728..263543 (+) 816 WP_000359729.1 ORF6C domain-containing protein -
  ACLBK7_RS01550 (ACLBK7_01550) - 263556..263753 (+) 198 WP_000665325.1 hypothetical protein -
  ACLBK7_RS01555 (ACLBK7_01555) - 263791..263937 (+) 147 WP_000390314.1 hypothetical protein -
  ACLBK7_RS01560 (ACLBK7_01560) - 263984..264160 (+) 177 WP_000364148.1 hypothetical protein -
  ACLBK7_RS01565 (ACLBK7_01565) - 264167..265054 (+) 888 WP_000073375.1 DnaD domain-containing protein -
  ACLBK7_RS01570 (ACLBK7_01570) - 264993..265868 (+) 876 WP_000235015.1 ATP-binding protein -
  ACLBK7_RS01575 (ACLBK7_01575) - 265884..266078 (+) 195 WP_000337986.1 hypothetical protein -
  ACLBK7_RS01580 (ACLBK7_01580) - 266104..266277 (+) 174 WP_000805170.1 DUF3954 domain-containing protein -
  ACLBK7_RS01585 (ACLBK7_01585) - 266292..266546 (+) 255 WP_000811696.1 hypothetical protein -
  ACLBK7_RS01590 (ACLBK7_01590) - 266555..267019 (+) 465 WP_002134040.1 hypothetical protein -
  ACLBK7_RS01595 (ACLBK7_01595) - 267046..267258 (+) 213 WP_000665841.1 hypothetical protein -
  ACLBK7_RS01600 (ACLBK7_01600) - 267303..267488 (+) 186 WP_002134037.1 hypothetical protein -
  ACLBK7_RS01605 (ACLBK7_01605) - 267540..267938 (+) 399 WP_000387671.1 hypothetical protein -
  ACLBK7_RS01610 (ACLBK7_01610) - 267963..268385 (+) 423 WP_000805074.1 hypothetical protein -
  ACLBK7_RS01615 (ACLBK7_01615) - 268420..268557 (+) 138 WP_000433730.1 hypothetical protein -
  ACLBK7_RS01620 (ACLBK7_01620) - 268561..268827 (+) 267 WP_000397931.1 hypothetical protein -
  ACLBK7_RS01625 (ACLBK7_01625) - 268865..269263 (+) 399 WP_000404182.1 hypothetical protein -
  ACLBK7_RS01630 (ACLBK7_01630) - 269301..269450 (+) 150 WP_000872736.1 hypothetical protein -
  ACLBK7_RS01635 (ACLBK7_01635) - 269550..269768 (+) 219 WP_000365653.1 hypothetical protein -
  ACLBK7_RS01640 (ACLBK7_01640) - 269955..270137 (+) 183 WP_000234108.1 hypothetical protein -
  ACLBK7_RS01645 (ACLBK7_01645) istA 270384..271679 (+) 1296 WP_000275580.1 IS21-like element IS232 family transposase -
  ACLBK7_RS01650 (ACLBK7_01650) istB 271669..272421 (+) 753 WP_000798699.1 IS21-like element IS232 family helper ATPase IstB -
  ACLBK7_RS01655 (ACLBK7_01655) - 272575..272778 (+) 204 WP_001202682.1 hypothetical protein -
  ACLBK7_RS01660 (ACLBK7_01660) - 272823..273104 (+) 282 WP_000525861.1 hypothetical protein -
  ACLBK7_RS01665 (ACLBK7_01665) - 273220..273390 (+) 171 WP_000866156.1 hypothetical protein -
  ACLBK7_RS01670 (ACLBK7_01670) - 273418..273900 (+) 483 WP_000166182.1 ArpU family phage packaging/lysis transcriptional regulator -
  ACLBK7_RS01675 (ACLBK7_01675) - 273900..274442 (+) 543 WP_001012113.1 site-specific integrase -
  ACLBK7_RS01680 (ACLBK7_01680) - 275118..275378 (+) 261 WP_000124642.1 hypothetical protein -
  ACLBK7_RS01685 (ACLBK7_01685) - 275520..275924 (+) 405 WP_000336221.1 hypothetical protein -
  ACLBK7_RS01690 (ACLBK7_01690) - 275921..276256 (+) 336 WP_000666403.1 HNH endonuclease -
  ACLBK7_RS01695 (ACLBK7_01695) - 276407..276742 (+) 336 WP_000124848.1 P27 family phage terminase small subunit -
  ACLBK7_RS01700 (ACLBK7_01700) - 276739..278397 (+) 1659 WP_000615714.1 terminase TerL endonuclease subunit -
  ACLBK7_RS01705 (ACLBK7_01705) - 278406..279569 (+) 1164 WP_000583771.1 phage portal protein -
  ACLBK7_RS01710 (ACLBK7_01710) - 279553..280329 (+) 777 WP_000216402.1 head maturation protease, ClpP-related -
  ACLBK7_RS01715 (ACLBK7_01715) - 280350..281513 (+) 1164 WP_000234863.1 phage major capsid protein -
  ACLBK7_RS01720 (ACLBK7_01720) - 281526..281822 (+) 297 WP_001243199.1 hypothetical protein -
  ACLBK7_RS01725 (ACLBK7_01725) - 281824..282198 (+) 375 WP_001182260.1 phage head closure protein -
  ACLBK7_RS01730 (ACLBK7_01730) - 282186..282623 (+) 438 WP_000818829.1 HK97-gp10 family putative phage morphogenesis protein -
  ACLBK7_RS01735 (ACLBK7_01735) - 282620..282982 (+) 363 WP_000793436.1 DUF3168 domain-containing protein -
  ACLBK7_RS01740 (ACLBK7_01740) - 282998..283582 (+) 585 WP_001251821.1 major tail protein -
  ACLBK7_RS01745 (ACLBK7_01745) gpG 283639..284011 (+) 373 Protein_290 phage tail assembly chaperone G -
  ACLBK7_RS01750 (ACLBK7_01750) - 284176..289173 (+) 4998 WP_001173498.1 phage tail tape measure protein -
  ACLBK7_RS01755 (ACLBK7_01755) - 289213..290682 (+) 1470 WP_000093847.1 distal tail protein Dit -
  ACLBK7_RS01760 (ACLBK7_01760) - 290679..296243 (+) 5565 WP_015382146.1 phage tail spike protein -
  ACLBK7_RS01765 (ACLBK7_01765) - 296260..296625 (+) 366 WP_015382147.1 hypothetical protein -
  ACLBK7_RS01770 (ACLBK7_01770) - 296752..296976 (+) 225 WP_000390477.1 hypothetical protein -
  ACLBK7_RS01775 (ACLBK7_01775) - 297052..297477 (+) 426 WP_000373855.1 holin family protein -
  ACLBK7_RS01780 (ACLBK7_01780) - 297477..298415 (+) 939 WP_000403436.1 N-acetylmuramoyl-L-alanine amidase -
  ACLBK7_RS01785 (ACLBK7_01785) - 298897..300117 (+) 1221 WP_033676384.1 IS110 family transposase -
  ACLBK7_RS01790 (ACLBK7_01790) - 301121..301387 (-) 267 WP_000956437.1 hypothetical protein -
  ACLBK7_RS01795 (ACLBK7_01795) - 301403..301594 (-) 192 WP_002134199.1 hypothetical protein -
  ACLBK7_RS01800 (ACLBK7_01800) recA 301936..303012 (+) 1077 WP_000741567.1 recombinase RecA Machinery gene
  ACLBK7_RS01805 (ACLBK7_01805) - 303176..304066 (-) 891 WP_002134197.1 hypothetical protein -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 38865.09 Da        Isoelectric Point: 4.8929

>NTDB_id=1094777 ACLBK7_RS01800 WP_000741567.1 301936..303012(+) (recA) [Bacillus cereus strain Ba 4]
MAATENTTKGKEKALEEALKKIEKDFGKGAVMKLGERPEQKISVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTL
ALHAIAEVQKQGGTAAFIDAEHALDPVYAEKLGVNIDELFVSQPNTGEEALEIAEALVRSSAVEIIVVDSVAALVPQAEI
DGDMGASHVGLQARLMGQALRKISGAVSKNGVIAIFLNQLREKVGVSFGNPETTPGGRALKFYSTVRLEVRRSEQLKQGS
DIVGNKTKVKVVKNKVAPPFRNLEFDIMYGEGISLEGELVDIGVGLDIVQKSGSWYSYKEERLGQGRDNAKQFLKENENI
RNSVRNEIYEYYSPKEESIIVEEELIKENEPITLKESE

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=1094777 ACLBK7_RS01800 WP_000741567.1 301936..303012(+) (recA) [Bacillus cereus strain Ba 4]
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATTGAAAAAGATTTTGG
CAAAGGTGCTGTTATGAAACTGGGTGAGCGACCTGAACAAAAAATATCTGTTGTGTCAAGTGGCTCTGTTGGATTAGATA
ATGCTTTAGGTGTTGGTGGATATCCGAAAGGGCGCATTACTGAAATCTTTGGTCCCGAATCTTCAGGAAAGACAACACTA
GCATTACATGCAATTGCAGAAGTTCAAAAACAAGGTGGAACTGCGGCATTTATTGATGCGGAACATGCGCTTGATCCTGT
ATATGCAGAAAAGTTAGGTGTAAATATTGATGAGTTGTTTGTGTCACAACCGAATACGGGAGAAGAGGCGTTAGAGATAG
CGGAAGCGTTAGTAAGAAGTAGCGCTGTTGAAATTATTGTAGTAGACTCTGTAGCAGCTCTAGTACCACAGGCAGAAATT
GATGGTGATATGGGAGCATCACATGTTGGACTGCAAGCAAGGCTGATGGGGCAAGCCTTGAGGAAGATATCAGGAGCAGT
ATCTAAAAATGGAGTAATAGCTATATTTTTGAATCAACTTAGAGAGAAAGTGGGCGTTTCATTTGGGAATCCCGAGACGA
CACCTGGTGGTAGAGCGTTGAAGTTTTATTCAACTGTCCGTCTCGAAGTACGTCGTTCGGAGCAGTTAAAGCAAGGCAGT
GACATTGTTGGTAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTCGAAATTTAGAATTTGATAT
TATGTATGGAGAAGGCATTTCCCTAGAGGGAGAGCTTGTTGATATTGGGGTAGGGTTAGATATTGTTCAGAAAAGCGGAT
CATGGTATTCGTATAAAGAGGAGCGTCTTGGGCAAGGTAGAGATAATGCTAAGCAATTCCTGAAAGAAAATGAAAATATA
CGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGAATCTATTATTGTGGAAGAGGAGCTTATAAA
AGAAAATGAGCCCATCACTTTAAAAGAATCTGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

76.087

89.944

0.684

  recA Streptococcus mutans UA159

62.817

99.162

0.623

  recA Latilactobacillus sakei subsp. sakei 23K

65.588

94.972

0.623

  recA Streptococcus mitis NCTC 12261

65.839

89.944

0.592

  recA Streptococcus pneumoniae D39

64.724

91.061

0.589

  recA Streptococcus pneumoniae Rx1

64.724

91.061

0.589

  recA Streptococcus pneumoniae R6

64.724

91.061

0.589

  recA Streptococcus pneumoniae TIGR4

64.724

91.061

0.589

  recA Streptococcus mitis SK321

65.528

89.944

0.589

  recA Streptococcus pyogenes NZ131

65.217

89.944

0.587

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.224

95.81

0.587

  recA Acinetobacter baumannii D1279779

58.79

96.927

0.57

  recA Neisseria gonorrhoeae MS11

63.323

89.106

0.564

  recA Neisseria gonorrhoeae MS11

63.323

89.106

0.564

  recA Neisseria gonorrhoeae strain FA1090

63.323

89.106

0.564

  recA Lactococcus lactis subsp. cremoris KW2

60.542

92.737

0.561

  recA Helicobacter pylori 26695

58.944

95.251

0.561

  recA Helicobacter pylori strain NCTC11637

58.944

95.251

0.561

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.009

89.106

0.561

  recA Acinetobacter baylyi ADP1

61.25

89.385

0.547

  recA Glaesserella parasuis strain SC1401

59.091

92.179

0.545

  recA Pseudomonas stutzeri DSM 10701

61.006

88.827

0.542

  recA Vibrio cholerae O1 biovar El Tor strain E7946

57.958

93.017

0.539

  recA Vibrio cholerae strain A1552

57.958

93.017

0.539

  recA Ralstonia pseudosolanacearum GMI1000

61.613

86.592

0.534

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

58.567

89.665

0.525


Multiple sequence alignment