Detailed information NTG1093101

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACMGE5_RS09715
• Genome accession: NZ_CP179734
• Coordinates: 1841851..1842912 (-)
• Length: 353 a.a.
• NCBI ID: WP_414046567.1
• Uniprot ID: -
• Organism: Macrococcus sp. 18KM444
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1824973..1844697	1841851..1842912	within	0

Gene organization within MGE regions

Location: 1824973..1844697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMGE5_RS09640 (ACMGE5_09640)	-	1824973..1826823 (-)	1851	WP_414046553.1	ABC transporter ATP-binding protein	-
ACMGE5_RS09645 (ACMGE5_09645)	-	1826816..1828531 (-)	1716	WP_414046554.1	ABC transporter ATP-binding protein	-
ACMGE5_RS09650 (ACMGE5_09650)	-	1828665..1829294 (+)	630	WP_414046868.1	VTT domain-containing protein	-
ACMGE5_RS09655 (ACMGE5_09655)	-	1829404..1830759 (+)	1356	Protein_1854	IS1182 family transposase	-
ACMGE5_RS09660 (ACMGE5_09660)	-	1830895..1831599 (-)	705	WP_414046556.1	ABC transporter ATP-binding protein	-
ACMGE5_RS09665 (ACMGE5_09665)	-	1831592..1832332 (-)	741	WP_414046869.1	ABC transporter permease	-
ACMGE5_RS09670 (ACMGE5_09670)	-	1832329..1832616 (-)	288	WP_414046558.1	MTH1187 family thiamine-binding protein	-
ACMGE5_RS09675 (ACMGE5_09675)	-	1832616..1833632 (-)	1017	WP_414046559.1	ABC transporter substrate-binding protein	-
ACMGE5_RS09680 (ACMGE5_09680)	-	1833999..1834985 (+)	987	WP_414046560.1	NlpC/P60 family protein	-
ACMGE5_RS09685 (ACMGE5_09685)	-	1835033..1835896 (-)	864	WP_414046561.1	2-oxoacid:ferredoxin oxidoreductase subunit beta	-
ACMGE5_RS09690 (ACMGE5_09690)	-	1835897..1837630 (-)	1734	WP_414046562.1	2-oxoacid:acceptor oxidoreductase subunit alpha	-
ACMGE5_RS09695 (ACMGE5_09695)	-	1837737..1838237 (-)	501	WP_414046563.1	DUF3467 domain-containing protein	-
ACMGE5_RS09700 (ACMGE5_09700)	-	1838254..1839045 (-)	792	WP_414046564.1	TIGR00282 family metallophosphoesterase	-
ACMGE5_RS09705 (ACMGE5_09705)	-	1839042..1839815 (-)	774	WP_414046565.1	hypothetical protein	-
ACMGE5_RS09710 (ACMGE5_09710)	rny	1840079..1841635 (-)	1557	WP_414046566.1	ribonuclease Y	-
ACMGE5_RS09715 (ACMGE5_09715)	recA	1841851..1842912 (-)	1062	WP_414046567.1	recombinase RecA	Machinery gene
ACMGE5_RS09720 (ACMGE5_09720)	-	1843345..1844697 (-)	1353	Protein_1867	IS1182 family transposase	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 38409.60 Da
• Isoelectric Point: 4.9264

>NTDB_id=1093101 ACMGE5_RS09715 WP_414046567.1 1841851..1842912(-) (recA) [Macrococcus sp. 18KM444]
MSERQKALDTVIKNMEKSFGKGAVMKLGENTAHNVSAVSSGSITLDNALGIGGYPKGRIIEIYGPESSGKTTVALHAIAE
VQKQGGIAAFIDAEHALDPVYAQKLGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDS
HMGLQARLMSQALRKLSGAVSKSNTIAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRT
KIKIVKNKVAPPFKVAEVDIMYGQGISREGEMVDLGAEYEVLQKSGAWYSYEGERIGQGRENIKTYLRENPEVRDEIDMK
IRKAMGIGEDKDAPKTELPSEPETDDLFDDELV

Nucleotide

• Length: 1062 bp

>NTDB_id=1093101 ACMGE5_RS09715 WP_414046567.1 1841851..1842912(-) (recA) [Macrococcus sp. 18KM444]
ATGAGTGAACGTCAAAAAGCTTTAGATACTGTAATTAAAAATATGGAAAAATCTTTCGGTAAAGGTGCCGTAATGAAACT
TGGAGAGAATACAGCACATAATGTATCTGCAGTATCTTCTGGTTCTATTACGTTAGATAATGCGTTAGGTATAGGTGGAT
ATCCGAAAGGCAGAATCATTGAAATTTATGGTCCTGAGAGTTCTGGTAAAACAACTGTAGCATTACACGCGATTGCTGAA
GTGCAAAAACAAGGTGGGATTGCTGCATTTATTGATGCGGAGCATGCTTTAGATCCTGTATATGCTCAAAAATTAGGTGT
AGATATTGATAACTTATATTTATCTCAACCTGACCATGGTGAGCAAGGTTTAGAAATTGCAGAGGCATTTGTTCGTAGTG
GTGCTGTTGATATTATTGTAGTCGATTCAGTTGCTGCATTAACACCGAAGGCAGAAATCGAAGGTGAAATGGGTGACTCT
CATATGGGTCTTCAGGCACGCTTGATGTCTCAAGCATTACGTAAGTTATCAGGTGCGGTTTCAAAATCGAACACGATCGC
GATATTTATTAACCAAGTACGTGAAAAAATTGGTGTAATGTTTGGTAACCCTGAAACTACACCAGGTGGTCGTGCATTAA
AATTCTATTCATCAGTACGTTTAGAAGTTCGTCGTGCTGAACAGTTAAAGCAAGGACAAGACATCGTGGGTAATCGTACT
AAAATTAAAATTGTTAAAAATAAAGTAGCGCCGCCATTCAAAGTAGCAGAAGTGGATATTATGTATGGACAAGGTATTTC
ACGAGAAGGTGAAATGGTCGATTTAGGTGCAGAATATGAAGTTTTACAAAAATCTGGAGCTTGGTACTCATACGAAGGAG
AACGTATTGGTCAGGGTAGAGAGAATATTAAAACTTACTTACGTGAGAATCCTGAAGTACGTGATGAAATCGATATGAAG
ATTAGAAAAGCGATGGGTATCGGAGAAGATAAGGACGCTCCTAAAACAGAATTACCATCAGAACCTGAAACAGATGATTT
ATTTGATGATGAATTAGTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (6-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Bacillus subtilis subsp. subtilis str. 168	76.758	92.635	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	69.429	99.15	0.688
recA	Streptococcus pyogenes NZ131	66.189	98.867	0.654
recA	Streptococcus mutans UA159	65.07	100	0.654
recA	Streptococcus pneumoniae R6	62.568	100	0.649
recA	Streptococcus pneumoniae Rx1	62.568	100	0.649
recA	Streptococcus pneumoniae D39	62.568	100	0.649
recA	Streptococcus pneumoniae TIGR4	62.568	100	0.649
recA	Streptococcus mitis SK321	64.412	96.317	0.62
recA	Streptococcus mitis NCTC 12261	66.061	93.484	0.618
recA	Acinetobacter baylyi ADP1	63.93	96.601	0.618
recA	Acinetobacter baumannii D1279779	63.824	96.317	0.615
recA	Lactococcus lactis subsp. cremoris KW2	64.478	94.901	0.612
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.692	92.068	0.586
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.975	91.218	0.584
recA	Vibrio cholerae strain A1552	63.975	91.218	0.584
recA	Helicobacter pylori strain NCTC11637	60.117	96.601	0.581
recA	Neisseria gonorrhoeae MS11	62.577	92.351	0.578
recA	Neisseria gonorrhoeae MS11	62.577	92.351	0.578
recA	Neisseria gonorrhoeae strain FA1090	62.577	92.351	0.578
recA	Helicobacter pylori 26695	59.824	96.601	0.578
recA	Ralstonia pseudosolanacearum GMI1000	64.856	88.669	0.575
recA	Glaesserella parasuis strain SC1401	58.601	97.167	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.162	92.635	0.567
recA	Pseudomonas stutzeri DSM 10701	57.02	98.867	0.564
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.486	93.201	0.564