Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACMGE6_RS11470 | Genome accession | NZ_CP179732 |
| Coordinates | 2159948..2161009 (-) | Length | 353 a.a. |
| NCBI ID | WP_414046567.1 | Uniprot ID | - |
| Organism | Macrococcus sp. 21KM1573 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2134499..2169881 | 2159948..2161009 | within | 0 |
Gene organization within MGE regions
Location: 2134499..2169881
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMGE6_RS11315 (ACMGE6_11315) | - | 2134499..2136349 (-) | 1851 | WP_414053855.1 | ABC transporter ATP-binding protein | - |
| ACMGE6_RS11320 (ACMGE6_11320) | - | 2136342..2138057 (-) | 1716 | WP_414053856.1 | ABC transporter ATP-binding protein | - |
| ACMGE6_RS11325 (ACMGE6_11325) | - | 2138191..2138832 (+) | 642 | WP_414053857.1 | VTT domain-containing protein | - |
| ACMGE6_RS11330 (ACMGE6_11330) | - | 2138859..2139563 (-) | 705 | WP_414053858.1 | ABC transporter ATP-binding protein | - |
| ACMGE6_RS11335 (ACMGE6_11335) | - | 2139556..2140296 (-) | 741 | WP_414053859.1 | ABC transporter permease | - |
| ACMGE6_RS11340 (ACMGE6_11340) | - | 2140293..2140580 (-) | 288 | WP_414053860.1 | MTH1187 family thiamine-binding protein | - |
| ACMGE6_RS11345 (ACMGE6_11345) | - | 2140580..2141596 (-) | 1017 | WP_414053861.1 | ABC transporter substrate-binding protein | - |
| ACMGE6_RS11350 (ACMGE6_11350) | - | 2141963..2142949 (+) | 987 | WP_414053862.1 | NlpC/P60 family protein | - |
| ACMGE6_RS11355 (ACMGE6_11355) | - | 2142997..2143860 (-) | 864 | WP_414053863.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| ACMGE6_RS11360 (ACMGE6_11360) | - | 2143861..2145594 (-) | 1734 | WP_414053864.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| ACMGE6_RS11365 (ACMGE6_11365) | - | 2145701..2146201 (-) | 501 | WP_414053865.1 | DUF3467 domain-containing protein | - |
| ACMGE6_RS11370 (ACMGE6_11370) | - | 2146218..2147009 (-) | 792 | WP_414053866.1 | TIGR00282 family metallophosphoesterase | - |
| ACMGE6_RS11375 (ACMGE6_11375) | - | 2147006..2147779 (-) | 774 | WP_414053867.1 | hypothetical protein | - |
| ACMGE6_RS11380 (ACMGE6_11380) | - | 2148456..2148884 (-) | 429 | WP_414053868.1 | hypothetical protein | - |
| ACMGE6_RS11385 (ACMGE6_11385) | - | 2149786..2150178 (-) | 393 | WP_414053869.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| ACMGE6_RS11390 (ACMGE6_11390) | - | 2150187..2150606 (-) | 420 | WP_414053870.1 | hypothetical protein | - |
| ACMGE6_RS11395 (ACMGE6_11395) | - | 2150668..2150970 (-) | 303 | WP_414053871.1 | hypothetical protein | - |
| ACMGE6_RS11400 (ACMGE6_11400) | - | 2150983..2151702 (-) | 720 | WP_414053872.1 | hypothetical protein | - |
| ACMGE6_RS11405 (ACMGE6_11405) | - | 2151704..2151892 (-) | 189 | WP_414053873.1 | hypothetical protein | - |
| ACMGE6_RS11410 (ACMGE6_11410) | - | 2151921..2152286 (-) | 366 | WP_414053874.1 | hypothetical protein | - |
| ACMGE6_RS11415 (ACMGE6_11415) | - | 2152319..2152573 (-) | 255 | WP_414053875.1 | hypothetical protein | - |
| ACMGE6_RS11420 (ACMGE6_11420) | - | 2152693..2153499 (-) | 807 | WP_414053876.1 | ATP-binding protein | - |
| ACMGE6_RS11425 (ACMGE6_11425) | - | 2153511..2154410 (-) | 900 | WP_414053877.1 | DnaD domain protein | - |
| ACMGE6_RS11430 (ACMGE6_11430) | - | 2154486..2154743 (-) | 258 | WP_414053878.1 | hypothetical protein | - |
| ACMGE6_RS11435 (ACMGE6_11435) | - | 2154740..2154922 (-) | 183 | WP_414053879.1 | hypothetical protein | - |
| ACMGE6_RS11440 (ACMGE6_11440) | - | 2154937..2155422 (-) | 486 | WP_414053880.1 | hypothetical protein | - |
| ACMGE6_RS11445 (ACMGE6_11445) | - | 2155443..2155712 (-) | 270 | WP_414053881.1 | hypothetical protein | - |
| ACMGE6_RS11450 (ACMGE6_11450) | - | 2155713..2155934 (-) | 222 | WP_414053882.1 | helix-turn-helix domain-containing protein | - |
| ACMGE6_RS11455 (ACMGE6_11455) | - | 2156092..2156823 (+) | 732 | WP_414053883.1 | helix-turn-helix domain-containing protein | - |
| ACMGE6_RS11460 (ACMGE6_11460) | - | 2156826..2158040 (+) | 1215 | WP_414053884.1 | tyrosine-type recombinase/integrase | - |
| ACMGE6_RS11465 (ACMGE6_11465) | rny | 2158176..2159732 (-) | 1557 | WP_414046566.1 | ribonuclease Y | - |
| ACMGE6_RS11470 (ACMGE6_11470) | recA | 2159948..2161009 (-) | 1062 | WP_414046567.1 | recombinase RecA | Machinery gene |
| ACMGE6_RS11475 (ACMGE6_11475) | pgsA | 2161353..2161934 (-) | 582 | WP_414046568.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ACMGE6_RS11480 (ACMGE6_11480) | - | 2161963..2162817 (-) | 855 | WP_414053885.1 | helix-turn-helix domain-containing protein | - |
| ACMGE6_RS11485 (ACMGE6_11485) | - | 2162836..2163630 (-) | 795 | WP_414048018.1 | DUF3388 domain-containing protein | - |
| ACMGE6_RS11490 (ACMGE6_11490) | ymfI | 2163642..2164352 (-) | 711 | WP_414053886.1 | elongation factor P 5-aminopentanone reductase | - |
| ACMGE6_RS11495 (ACMGE6_11495) | yfmH | 2164345..2165619 (-) | 1275 | WP_414053887.1 | EF-P 5-aminopentanol modification-associated protein YfmH | - |
| ACMGE6_RS11500 (ACMGE6_11500) | yfmF | 2165616..2166845 (-) | 1230 | WP_414053888.1 | EF-P 5-aminopentanol modification-associated protein YfmF | - |
| ACMGE6_RS11505 (ACMGE6_11505) | - | 2166855..2167571 (-) | 717 | WP_414048014.1 | GntR family transcriptional regulator | - |
| ACMGE6_RS11510 (ACMGE6_11510) | - | 2167587..2169881 (-) | 2295 | WP_414053889.1 | DNA translocase FtsK | - |
Sequence
Protein
Download Length: 353 a.a. Molecular weight: 38409.60 Da Isoelectric Point: 4.9264
>NTDB_id=1093073 ACMGE6_RS11470 WP_414046567.1 2159948..2161009(-) (recA) [Macrococcus sp. 21KM1573]
MSERQKALDTVIKNMEKSFGKGAVMKLGENTAHNVSAVSSGSITLDNALGIGGYPKGRIIEIYGPESSGKTTVALHAIAE
VQKQGGIAAFIDAEHALDPVYAQKLGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDS
HMGLQARLMSQALRKLSGAVSKSNTIAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRT
KIKIVKNKVAPPFKVAEVDIMYGQGISREGEMVDLGAEYEVLQKSGAWYSYEGERIGQGRENIKTYLRENPEVRDEIDMK
IRKAMGIGEDKDAPKTELPSEPETDDLFDDELV
MSERQKALDTVIKNMEKSFGKGAVMKLGENTAHNVSAVSSGSITLDNALGIGGYPKGRIIEIYGPESSGKTTVALHAIAE
VQKQGGIAAFIDAEHALDPVYAQKLGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIIVVDSVAALTPKAEIEGEMGDS
HMGLQARLMSQALRKLSGAVSKSNTIAIFINQVREKIGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRT
KIKIVKNKVAPPFKVAEVDIMYGQGISREGEMVDLGAEYEVLQKSGAWYSYEGERIGQGRENIKTYLRENPEVRDEIDMK
IRKAMGIGEDKDAPKTELPSEPETDDLFDDELV
Nucleotide
Download Length: 1062 bp
>NTDB_id=1093073 ACMGE6_RS11470 WP_414046567.1 2159948..2161009(-) (recA) [Macrococcus sp. 21KM1573]
ATGAGTGAACGTCAAAAAGCTTTAGATACTGTAATTAAAAATATGGAAAAATCTTTCGGTAAAGGTGCCGTAATGAAACT
TGGAGAGAATACAGCACATAATGTATCTGCAGTATCTTCTGGTTCTATTACGTTAGATAATGCATTAGGTATAGGTGGAT
ATCCGAAAGGCAGAATCATTGAAATTTATGGTCCTGAGAGTTCTGGTAAAACAACTGTAGCATTACACGCGATTGCTGAA
GTGCAAAAACAAGGTGGGATTGCTGCATTTATTGATGCGGAGCATGCTTTAGATCCTGTATATGCTCAAAAATTAGGTGT
AGATATTGATAACTTATATTTATCTCAACCTGACCATGGTGAGCAAGGTTTAGAAATTGCAGAGGCATTTGTTCGTAGTG
GTGCTGTTGATATTATTGTAGTCGATTCAGTTGCTGCATTAACACCGAAGGCAGAAATCGAGGGTGAAATGGGTGACTCT
CATATGGGTCTTCAGGCACGCTTGATGTCTCAAGCATTACGTAAGTTATCAGGTGCGGTTTCAAAATCGAACACGATCGC
GATATTTATTAACCAAGTACGTGAAAAAATTGGTGTAATGTTTGGTAACCCTGAAACTACACCAGGTGGTCGTGCATTAA
AATTCTATTCATCAGTACGTTTAGAAGTTCGTCGTGCTGAACAGTTAAAGCAAGGACAAGACATCGTGGGTAATCGTACT
AAAATTAAAATTGTTAAAAATAAAGTAGCGCCGCCATTCAAAGTAGCAGAAGTGGATATTATGTATGGACAAGGTATTTC
ACGAGAAGGTGAAATGGTCGATTTAGGTGCAGAATATGAAGTTTTACAAAAATCTGGAGCTTGGTACTCATACGAAGGAG
AACGTATTGGTCAGGGTAGAGAGAATATTAAAACTTACTTACGTGAGAATCCTGAAGTACGTGATGAAATCGATATGAAG
ATTAGAAAAGCGATGGGTATCGGAGAAGATAAGGACGCTCCTAAAACAGAATTACCATCAGAACCTGAAACAGATGATTT
ATTTGATGATGAATTAGTATAA
ATGAGTGAACGTCAAAAAGCTTTAGATACTGTAATTAAAAATATGGAAAAATCTTTCGGTAAAGGTGCCGTAATGAAACT
TGGAGAGAATACAGCACATAATGTATCTGCAGTATCTTCTGGTTCTATTACGTTAGATAATGCATTAGGTATAGGTGGAT
ATCCGAAAGGCAGAATCATTGAAATTTATGGTCCTGAGAGTTCTGGTAAAACAACTGTAGCATTACACGCGATTGCTGAA
GTGCAAAAACAAGGTGGGATTGCTGCATTTATTGATGCGGAGCATGCTTTAGATCCTGTATATGCTCAAAAATTAGGTGT
AGATATTGATAACTTATATTTATCTCAACCTGACCATGGTGAGCAAGGTTTAGAAATTGCAGAGGCATTTGTTCGTAGTG
GTGCTGTTGATATTATTGTAGTCGATTCAGTTGCTGCATTAACACCGAAGGCAGAAATCGAGGGTGAAATGGGTGACTCT
CATATGGGTCTTCAGGCACGCTTGATGTCTCAAGCATTACGTAAGTTATCAGGTGCGGTTTCAAAATCGAACACGATCGC
GATATTTATTAACCAAGTACGTGAAAAAATTGGTGTAATGTTTGGTAACCCTGAAACTACACCAGGTGGTCGTGCATTAA
AATTCTATTCATCAGTACGTTTAGAAGTTCGTCGTGCTGAACAGTTAAAGCAAGGACAAGACATCGTGGGTAATCGTACT
AAAATTAAAATTGTTAAAAATAAAGTAGCGCCGCCATTCAAAGTAGCAGAAGTGGATATTATGTATGGACAAGGTATTTC
ACGAGAAGGTGAAATGGTCGATTTAGGTGCAGAATATGAAGTTTTACAAAAATCTGGAGCTTGGTACTCATACGAAGGAG
AACGTATTGGTCAGGGTAGAGAGAATATTAAAACTTACTTACGTGAGAATCCTGAAGTACGTGATGAAATCGATATGAAG
ATTAGAAAAGCGATGGGTATCGGAGAAGATAAGGACGCTCCTAAAACAGAATTACCATCAGAACCTGAAACAGATGATTT
ATTTGATGATGAATTAGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.