Detailed information NTG1092820

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACLUPT_RS31105
• Genome accession: NZ_CP179718
• Coordinates: 6674020..6675126 (-)
• Length: 368 a.a.
• NCBI ID: WP_237677988.1
• Uniprot ID: -
• Organism: Variovorax sp. SCN45
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6669020..6680126

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLUPT_RS31070 (ACLUPT_31070)	-	6669056..6669739 (+)	684	WP_237677994.1	amino acid ABC transporter permease	-
ACLUPT_RS31075 (ACLUPT_31075)	-	6669765..6670412 (+)	648	WP_237680486.1	amino acid ABC transporter permease	-
ACLUPT_RS31080 (ACLUPT_31080)	-	6670396..6671124 (+)	729	WP_237677993.1	amino acid ABC transporter ATP-binding protein	-
ACLUPT_RS31085 (ACLUPT_31085)	-	6671157..6671984 (+)	828	WP_237677992.1	transporter substrate-binding domain-containing protein	-
ACLUPT_RS31090 (ACLUPT_31090)	-	6671990..6673099 (+)	1110	WP_237677991.1	mandelate racemase/muconate lactonizing enzyme family protein	-
ACLUPT_RS31095 (ACLUPT_31095)	-	6673101..6673532 (-)	432	WP_237677990.1	SRPBCC family protein	-
ACLUPT_RS31100 (ACLUPT_31100)	recX	6673513..6673974 (-)	462	WP_237677989.1	recombination regulator RecX	-
ACLUPT_RS31105 (ACLUPT_31105)	recA	6674020..6675126 (-)	1107	WP_237677988.1	recombinase RecA	Machinery gene
ACLUPT_RS31110 (ACLUPT_31110)	-	6675272..6675757 (+)	486	WP_237677987.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACLUPT_RS31115 (ACLUPT_31115)	-	6675824..6676498 (+)	675	WP_081268702.1	response regulator transcription factor	-
ACLUPT_RS31120 (ACLUPT_31120)	-	6676536..6677978 (+)	1443	WP_237677986.1	sensor histidine kinase	-
ACLUPT_RS31125 (ACLUPT_31125)	-	6677985..6678233 (-)	249	WP_237677985.1	sporulation protein	-
ACLUPT_RS31130 (ACLUPT_31130)	-	6678247..6679059 (-)	813	WP_237677984.1	biotin--[acetyl-CoA-carboxylase] ligase	-
ACLUPT_RS31135 (ACLUPT_31135)	-	6679062..6679727 (-)	666	WP_237677983.1	SET domain-containing protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 39155.00 Da
• Isoelectric Point: 5.3886

>NTDB_id=1092820 ACLUPT_RS31105 WP_237677988.1 6674020..6675126(-) (recA) [Variovorax sp. SCN45]
MDAVVKGASISVANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPE
SSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAA
LTPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
GTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKIVDKSGAWYAYNGEKIGQGRDNAREF
LRENPELSREIENKVRESLGIPLLAADAGATPEKPQKAAKAEKADKGE

Nucleotide

• Length: 1107 bp

>NTDB_id=1092820 ACLUPT_RS31105 WP_237677988.1 6674020..6675126(-) (recA) [Variovorax sp. SCN45]
ATGGACGCAGTCGTCAAGGGCGCAAGCATCTCGGTCGCCAACAGTGAAAAAGCCAAGGCCCTGCAGGCCGCGCTGGCCCA
GATCGAAAAGCAGTTCGGCAAGGGCACGATCATGCGGCTCGGCGAAGGCGAGGCGCTGGAAGACATCCAGGTGGTCTCGA
CCGGCTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGTGGCCTGCCGCGCGGCCGCGTCATCGAAATCTACGGCCCTGAA
TCCTCGGGCAAGACCACGCTCACGCTGCAGGTCATTGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGC
CGAACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTCAACCTGTCCGACCTGCTGATCAGCCAGCCCGACACCG
GAGAGCAGGCCCTGGAAATCGTCGATTCGCTGGTGCGTTCGGGCGCGGTGGACCTGATCGTGGTCGACTCGGTCGCAGCG
CTCACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACTCGCTGCCCGGCCTGCAGGCGCGCCTGATGAGCCAGGCGCT
GCGCAAGCTCACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGA
TGTTCGGTTCGCCCGAAACCACCACCGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATC
GGCACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCCCCGTT
CAAGACGGCGGAGTTCGACATCCTGTTCGGCGAAGGCATCAGCCGCGAAGGCGAGATCATCGACATGGGCGTGACCGCCA
AGATCGTCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTC
CTGCGCGAGAACCCCGAGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCATTCCGCTGCTGGCCGCCGA
CGCCGGCGCCACGCCCGAAAAGCCGCAGAAGGCCGCCAAGGCCGAAAAGGCGGACAAGGGCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	81.525	92.663	0.755
recA	Pseudomonas stutzeri DSM 10701	71.091	92.12	0.655
recA	Acinetobacter baylyi ADP1	72.086	88.587	0.639
recA	Neisseria gonorrhoeae MS11	71.212	89.674	0.639
recA	Neisseria gonorrhoeae MS11	71.212	89.674	0.639
recA	Neisseria gonorrhoeae strain FA1090	71.212	89.674	0.639
recA	Acinetobacter baumannii D1279779	71.472	88.587	0.633
recA	Glaesserella parasuis strain SC1401	71.605	88.043	0.63
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.213	89.402	0.628
recA	Vibrio cholerae strain A1552	70.213	89.402	0.628
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.085	89.402	0.609
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.465	89.946	0.598
recA	Helicobacter pylori strain NCTC11637	65.549	89.13	0.584
recA	Helicobacter pylori 26695	65.549	89.13	0.584
recA	Bacillus subtilis subsp. subtilis str. 168	65.138	88.859	0.579
recA	Streptococcus mutans UA159	59.437	96.467	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	62.424	89.674	0.56
recA	Streptococcus pyogenes NZ131	62.006	89.402	0.554
recA	Lactococcus lactis subsp. cremoris KW2	61.329	89.946	0.552
recA	Streptococcus pneumoniae D39	61.329	89.946	0.552
recA	Streptococcus pneumoniae R6	61.329	89.946	0.552
recA	Streptococcus pneumoniae TIGR4	61.329	89.946	0.552
recA	Streptococcus pneumoniae Rx1	61.329	89.946	0.552
recA	Streptococcus mitis SK321	61.027	89.946	0.549
recA	Streptococcus mitis NCTC 12261	61.027	89.946	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	87.228	0.535