Detailed information NTG1092030

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACMDCR_RS14445
• Genome accession: NZ_CP178864
• Coordinates: 3103506..3104579 (+)
• Length: 357 a.a.
• NCBI ID: WP_413993174.1
• Uniprot ID: -
• Organism: Labrys okinawensis strain DSM 18385
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3098506..3109579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMDCR_RS14435 (ACMDCR_14435)	-	3099821..3101461 (+)	1641	WP_413993172.1	fumarate hydratase	-
ACMDCR_RS14440 (ACMDCR_14440)	-	3101767..3103053 (+)	1287	WP_413993173.1	porin	-
ACMDCR_RS14445 (ACMDCR_14445)	recA	3103506..3104579 (+)	1074	WP_413993174.1	recombinase RecA	Machinery gene
ACMDCR_RS14450 (ACMDCR_14450)	-	3104752..3105669 (-)	918	WP_413993175.1	NAD(P)-dependent oxidoreductase	-
ACMDCR_RS14455 (ACMDCR_14455)	alaS	3106122..3108773 (+)	2652	WP_413993619.1	alanine--tRNA ligase	-
ACMDCR_RS14460 (ACMDCR_14460)	-	3108774..3108965 (+)	192	WP_413993176.1	hypothetical protein	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38402.03 Da
• Isoelectric Point: 5.3603

>NTDB_id=1092030 ACMDCR_RS14445 WP_413993174.1 3103506..3104579(+) (recA) [Labrys okinawensis strain DSM 18385]
MSQTQLRLVEGTSMDKTKALDAALSQIERSFGKGSIMRLGKGTKSMEVEAIPTGSLGLDIALGVGGLPKGRVIEIYGPES
SGKTTLALHSVAEAQKKGGVCAFIDAEHALDPIYARKLGVNLDDLLISQPDTGEQALEICDTLVRSGAIDVIVIDSVAAL
TPKAEIEGEMGDVQPGLQARLMSQALRKLTASIGRSNSMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRVG
AIKDREEVVGNQTRVKVVKNKVAPPFKQIEFDIMYGEGVSKVGELVDLGVKAGVVEKSGAWFSYESQRLGQGRENAKQFL
KENTDIANKIEQAIRQNAGLIAERILDNIDPSEAEDE

Nucleotide

• Length: 1074 bp

>NTDB_id=1092030 ACMDCR_RS14445 WP_413993174.1 3103506..3104579(+) (recA) [Labrys okinawensis strain DSM 18385]
ATGAGTCAGACACAGCTGCGCTTGGTCGAAGGAACTTCCATGGACAAGACGAAGGCGCTCGACGCCGCCCTATCACAGAT
CGAACGTTCCTTTGGGAAAGGTTCGATCATGCGCCTCGGCAAGGGCACCAAGTCGATGGAGGTGGAGGCGATCCCCACCG
GCTCGCTGGGGCTCGATATTGCGCTCGGCGTCGGCGGCTTGCCCAAAGGTCGTGTCATCGAAATTTACGGGCCTGAATCC
TCGGGCAAGACCACTCTGGCGCTGCACAGCGTTGCCGAAGCACAGAAGAAGGGCGGTGTCTGCGCCTTCATCGATGCCGA
ACATGCGCTCGATCCGATCTATGCCCGCAAGCTCGGCGTCAATCTCGACGATCTCCTGATCTCCCAGCCCGATACGGGCG
AACAGGCGCTGGAGATCTGCGACACCCTGGTGCGCTCTGGCGCCATCGACGTCATCGTCATCGATTCCGTCGCCGCCCTG
ACGCCGAAGGCCGAAATCGAAGGCGAGATGGGCGACGTCCAGCCCGGCCTGCAGGCTCGCCTTATGAGCCAGGCGCTGCG
CAAGCTCACCGCTTCGATCGGCCGTTCCAATTCCATGGTGATCTTTATCAACCAGATCCGCATGAAGATCGGCGTGATGT
ATGGCAGCCCCGAGACGACGACGGGCGGCAACGCCCTGAAGTTCTATGCTTCCGTGCGCCTCGATATCCGCCGCGTCGGC
GCCATCAAGGACCGCGAGGAGGTCGTCGGCAACCAGACCCGCGTCAAGGTGGTCAAGAACAAGGTGGCGCCGCCCTTCAA
GCAGATCGAATTCGACATCATGTATGGCGAAGGCGTGTCGAAGGTGGGCGAACTGGTCGATCTCGGCGTCAAGGCGGGCG
TGGTCGAGAAGTCCGGCGCCTGGTTCAGCTATGAGAGCCAGCGCCTCGGGCAAGGGCGTGAGAACGCCAAGCAGTTCCTC
AAGGAAAATACCGATATCGCCAACAAGATCGAGCAGGCGATCCGTCAGAATGCCGGTCTGATTGCCGAGCGCATCCTCGA
CAATATCGACCCGTCCGAGGCGGAAGACGAGTAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.254	93.838	0.65
recA	Vibrio cholerae strain A1552	69.254	93.838	0.65
recA	Neisseria gonorrhoeae MS11	66.571	97.199	0.647
recA	Neisseria gonorrhoeae strain FA1090	66.571	97.199	0.647
recA	Neisseria gonorrhoeae MS11	66.571	97.199	0.647
recA	Ralstonia pseudosolanacearum GMI1000	72.611	87.955	0.639
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	68.598	91.877	0.63
recA	Acinetobacter baumannii D1279779	69.876	90.196	0.63
recA	Glaesserella parasuis strain SC1401	70.093	89.916	0.63
recA	Pseudomonas stutzeri DSM 10701	69.782	89.916	0.627
recA	Acinetobacter baylyi ADP1	69.255	90.196	0.625
recA	Bacillus subtilis subsp. subtilis str. 168	66.258	91.317	0.605
recA	Helicobacter pylori strain NCTC11637	66.055	91.597	0.605
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.749	91.597	0.602
recA	Helicobacter pylori 26695	65.443	91.597	0.599
recA	Streptococcus pneumoniae R6	58.213	97.199	0.566
recA	Streptococcus pneumoniae TIGR4	58.213	97.199	0.566
recA	Streptococcus pneumoniae Rx1	58.213	97.199	0.566
recA	Streptococcus pneumoniae D39	58.213	97.199	0.566
recA	Latilactobacillus sakei subsp. sakei 23K	61.043	91.317	0.557
recA	Streptococcus mutans UA159	57.061	97.199	0.555
recA	Streptococcus mitis NCTC 12261	59.819	92.717	0.555
recA	Streptococcus mitis SK321	59.517	92.717	0.552
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.18	90.196	0.552
recA	Lactococcus lactis subsp. cremoris KW2	58.912	92.717	0.546
recA	Streptococcus pyogenes NZ131	58.663	92.157	0.541