Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACLH0I_RS06895 | Genome accession | NZ_CP176770 |
| Coordinates | 1575829..1576881 (+) | Length | 350 a.a. |
| NCBI ID | WP_014336835.1 | Uniprot ID | A0A0F4XHC7 |
| Organism | Pseudomonas sp. MPB03 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1541860..1581390 | 1575829..1576881 | within | 0 |
Gene organization within MGE regions
Location: 1541860..1581390
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLH0I_RS06680 (ACLH0I_06680) | mutS | 1541860..1544427 (-) | 2568 | WP_411387467.1 | DNA mismatch repair protein MutS | - |
| ACLH0I_RS06685 (ACLH0I_06685) | - | 1544810..1545163 (-) | 354 | WP_411386616.1 | DUF6124 family protein | - |
| ACLH0I_RS06690 (ACLH0I_06690) | - | 1545726..1546460 (+) | 735 | WP_411387468.1 | helix-turn-helix transcriptional regulator | - |
| ACLH0I_RS06695 (ACLH0I_06695) | - | 1546793..1546948 (+) | 156 | WP_411386617.1 | hypothetical protein | - |
| ACLH0I_RS06700 (ACLH0I_06700) | - | 1546991..1547419 (+) | 429 | WP_411386618.1 | hypothetical protein | - |
| ACLH0I_RS06705 (ACLH0I_06705) | - | 1547548..1547898 (+) | 351 | WP_057451604.1 | phage holin family protein | - |
| ACLH0I_RS06710 (ACLH0I_06710) | - | 1547935..1548447 (+) | 513 | WP_411386619.1 | hypothetical protein | - |
| ACLH0I_RS06715 (ACLH0I_06715) | - | 1548451..1549062 (+) | 612 | WP_411386620.1 | phage baseplate assembly protein V | - |
| ACLH0I_RS06720 (ACLH0I_06720) | - | 1549074..1549406 (+) | 333 | WP_207965436.1 | phage baseplate protein | - |
| ACLH0I_RS06725 (ACLH0I_06725) | - | 1549403..1550398 (+) | 996 | WP_411386621.1 | baseplate J/gp47 family protein | - |
| ACLH0I_RS06730 (ACLH0I_06730) | - | 1550395..1551039 (+) | 645 | WP_411386622.1 | phage tail protein I | - |
| ACLH0I_RS06735 (ACLH0I_06735) | - | 1551036..1551566 (+) | 531 | WP_411386623.1 | hypothetical protein | - |
| ACLH0I_RS06740 (ACLH0I_06740) | - | 1551590..1552210 (+) | 621 | WP_411386624.1 | hypothetical protein | - |
| ACLH0I_RS06745 (ACLH0I_06745) | - | 1552220..1552477 (+) | 258 | WP_411386625.1 | tail fiber assembly protein | - |
| ACLH0I_RS06750 (ACLH0I_06750) | - | 1552563..1552790 (+) | 228 | WP_411386626.1 | hypothetical protein | - |
| ACLH0I_RS06755 (ACLH0I_06755) | - | 1552793..1553959 (+) | 1167 | WP_411386627.1 | phage tail protein | - |
| ACLH0I_RS06760 (ACLH0I_06760) | - | 1553959..1554465 (+) | 507 | WP_250965891.1 | phage major tail tube protein | - |
| ACLH0I_RS06765 (ACLH0I_06765) | - | 1554616..1555191 (+) | 576 | WP_411386628.1 | phage tail assembly protein | - |
| ACLH0I_RS06770 (ACLH0I_06770) | - | 1555320..1557497 (+) | 2178 | WP_411386629.1 | phage tail tape measure protein | - |
| ACLH0I_RS06775 (ACLH0I_06775) | - | 1557497..1557880 (+) | 384 | WP_186705531.1 | phage tail protein | - |
| ACLH0I_RS06780 (ACLH0I_06780) | - | 1557873..1558085 (+) | 213 | WP_186728883.1 | tail protein X | - |
| ACLH0I_RS06785 (ACLH0I_06785) | - | 1558095..1559111 (+) | 1017 | WP_411386630.1 | phage late control D family protein | - |
| ACLH0I_RS06790 (ACLH0I_06790) | - | 1559387..1559971 (+) | 585 | WP_411386631.1 | hypothetical protein | - |
| ACLH0I_RS06795 (ACLH0I_06795) | - | 1559968..1560150 (+) | 183 | WP_046054585.1 | DUF2635 domain-containing protein | - |
| ACLH0I_RS06800 (ACLH0I_06800) | - | 1560150..1561646 (+) | 1497 | WP_411386632.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| ACLH0I_RS06805 (ACLH0I_06805) | - | 1561891..1562238 (+) | 348 | WP_003198314.1 | phage tail tube protein | - |
| ACLH0I_RS06810 (ACLH0I_06810) | - | 1562235..1562531 (+) | 297 | WP_045155211.1 | phage tail assembly protein | - |
| ACLH0I_RS06815 (ACLH0I_06815) | - | 1562662..1564236 (+) | 1575 | WP_411386633.1 | phage tail protein | - |
| ACLH0I_RS06820 (ACLH0I_06820) | - | 1564223..1565461 (+) | 1239 | WP_411386634.1 | DNA circularization protein | - |
| ACLH0I_RS06825 (ACLH0I_06825) | - | 1565465..1566505 (+) | 1041 | WP_411386635.1 | phage baseplate assembly protein | - |
| ACLH0I_RS06830 (ACLH0I_06830) | - | 1566707..1567216 (+) | 510 | WP_411386636.1 | phage baseplate assembly protein V | - |
| ACLH0I_RS06835 (ACLH0I_06835) | - | 1567216..1567614 (+) | 399 | WP_079303617.1 | phage GP46 family protein | - |
| ACLH0I_RS06840 (ACLH0I_06840) | - | 1567604..1568644 (+) | 1041 | WP_411386637.1 | baseplate J/gp47 family protein | - |
| ACLH0I_RS06845 (ACLH0I_06845) | - | 1568632..1569231 (+) | 600 | WP_411386638.1 | YmfQ family protein | - |
| ACLH0I_RS06850 (ACLH0I_06850) | - | 1569243..1570406 (+) | 1164 | WP_411386639.1 | phage tail protein | - |
| ACLH0I_RS06855 (ACLH0I_06855) | - | 1570403..1570912 (+) | 510 | WP_411386640.1 | phage tail protein | - |
| ACLH0I_RS06860 (ACLH0I_06860) | - | 1570941..1572038 (+) | 1098 | WP_411386641.1 | phage tail protein | - |
| ACLH0I_RS06865 (ACLH0I_06865) | - | 1572046..1572606 (+) | 561 | WP_411386642.1 | tail fiber assembly protein | - |
| ACLH0I_RS06870 (ACLH0I_06870) | - | 1572725..1573621 (+) | 897 | WP_411386643.1 | gp53-like domain-containing protein | - |
| ACLH0I_RS06875 (ACLH0I_06875) | - | 1573622..1574068 (+) | 447 | WP_411386644.1 | phage tail assembly chaperone | - |
| ACLH0I_RS06880 (ACLH0I_06880) | - | 1574092..1574655 (+) | 564 | WP_411386645.1 | glycoside hydrolase family 19 protein | - |
| ACLH0I_RS06885 (ACLH0I_06885) | - | 1574637..1575173 (+) | 537 | WP_250965885.1 | lysis system i-spanin subunit Rz | - |
| ACLH0I_RS06890 (ACLH0I_06890) | - | 1575245..1575745 (+) | 501 | WP_411386646.1 | CinA family protein | - |
| ACLH0I_RS06895 (ACLH0I_06895) | recA | 1575829..1576881 (+) | 1053 | WP_014336835.1 | recombinase RecA | Machinery gene |
| ACLH0I_RS06900 (ACLH0I_06900) | recX | 1576890..1577357 (+) | 468 | WP_411386647.1 | recombination regulator RecX | - |
| ACLH0I_RS06905 (ACLH0I_06905) | - | 1577403..1578521 (-) | 1119 | WP_411386648.1 | TIGR00730 family Rossman fold protein | - |
| ACLH0I_RS06910 (ACLH0I_06910) | - | 1578974..1579168 (+) | 195 | WP_186705555.1 | hypothetical protein | - |
| ACLH0I_RS06915 (ACLH0I_06915) | - | 1579169..1579591 (-) | 423 | WP_003198359.1 | quorum-sensing-regulated virulence factor family protein | - |
| ACLH0I_RS06920 (ACLH0I_06920) | - | 1579776..1580522 (+) | 747 | WP_250965941.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACLH0I_RS06925 (ACLH0I_06925) | erdR | 1580737..1581390 (+) | 654 | WP_186705557.1 | response regulator transcription factor ErdR | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37256.75 Da Isoelectric Point: 5.5226
>NTDB_id=1082829 ACLH0I_RS06895 WP_014336835.1 1575829..1576881(+) (recA) [Pseudomonas sp. MPB03]
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGTKIGQGKANSAKFLADNPEVAAALEK
QLRDKLLSPVADVKSVANREPVDDLADADI
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGTKIGQGKANSAKFLADNPEVAAALEK
QLRDKLLSPVADVKSVANREPVDDLADADI
Nucleotide
Download Length: 1053 bp
>NTDB_id=1082829 ACLH0I_RS06895 WP_014336835.1 1575829..1576881(+) (recA) [Pseudomonas sp. MPB03]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCTTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCAGGACCGTCAGGCTATTCCTTCCATCTCCACCGGCTCCCTGGGCCTGGACATTGCGCTAGGCATTGGCG
GTCTGCCAAAAGGCCGGATCGTTGAAATCTACGGTCCTGAATCGTCCGGTAAAACCACACTGACCTTGTCCGTGATCGCC
CAGGCCCAAAAAGCCGGCGCGACCTGCGCCTTCGTCGATGCCGAACACGCCCTGGACCCGGAGTACGCCGGCAAACTGGG
TGTCAACGTCGACGACCTGCTGGTTTCCCAGCCGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGTT
CCAATGCGGTTGACGTGATCATCGTCGACTCCGTGGCTGCACTGGTGCCAAAGGCTGAAATCGAAGGTGAAATGGGCGAC
ATGCACGTGGGCCTCCAGGCTCGCCTGATGTCCCAGGCCCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCAC
TGAAGTTCTACGCCTCGGTTCGCCTCGACATCCGCCGTACCGGCGCGGTGAAAGAAGGTGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGGTCGTGAAGAACAAGGTGGCTTCGCCGTTCCGCCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAATGGCGAGATGATCGACCTGGGTGTGTTGCACGGTTTCGTCGAGAAGTCGGGCGCCTGGTACGCCTACAACG
GCACCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGAAGTTGCCGCGGCCCTCGAGAAG
CAGCTGCGTGACAAGCTGTTGAGCCCGGTGGCAGACGTCAAGTCCGTGGCTAATCGCGAGCCCGTTGACGACCTGGCTGA
TGCCGACATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCTTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCAGGACCGTCAGGCTATTCCTTCCATCTCCACCGGCTCCCTGGGCCTGGACATTGCGCTAGGCATTGGCG
GTCTGCCAAAAGGCCGGATCGTTGAAATCTACGGTCCTGAATCGTCCGGTAAAACCACACTGACCTTGTCCGTGATCGCC
CAGGCCCAAAAAGCCGGCGCGACCTGCGCCTTCGTCGATGCCGAACACGCCCTGGACCCGGAGTACGCCGGCAAACTGGG
TGTCAACGTCGACGACCTGCTGGTTTCCCAGCCGGACACCGGCGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGTT
CCAATGCGGTTGACGTGATCATCGTCGACTCCGTGGCTGCACTGGTGCCAAAGGCTGAAATCGAAGGTGAAATGGGCGAC
ATGCACGTGGGCCTCCAGGCTCGCCTGATGTCCCAGGCCCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCAC
TGAAGTTCTACGCCTCGGTTCGCCTCGACATCCGCCGTACCGGCGCGGTGAAAGAAGGTGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGGTCGTGAAGAACAAGGTGGCTTCGCCGTTCCGCCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAATGGCGAGATGATCGACCTGGGTGTGTTGCACGGTTTCGTCGAGAAGTCGGGCGCCTGGTACGCCTACAACG
GCACCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGATAACCCGGAAGTTGCCGCGGCCCTCGAGAAG
CAGCTGCGTGACAAGCTGTTGAGCCCGGTGGCAGACGTCAAGTCCGTGGCTAATCGCGAGCCCGTTGACGACCTGGCTGA
TGCCGACATCTGA
Similar proteins
Only experimentally validated proteins are listed.