Detailed information NTG1081822

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACK2JG_RS09335
• Genome accession: NZ_CP176639
• Coordinates: 2164058..2165251 (-)
• Length: 397 a.a.
• NCBI ID: WP_007052644.1
• Uniprot ID: A0A0S2MDJ7
• Organism: Bifidobacterium longum strain SFAD19
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2159058..2170251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2JG_RS09320	hpf	2161923..2162585 (-)	663	WP_007052648.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACK2JG_RS09330	-	2163462..2164055 (-)	594	WP_032735795.1	regulatory protein RecX	-
ACK2JG_RS09335	recA	2164058..2165251 (-)	1194	WP_007052644.1	recombinase RecA	Machinery gene
ACK2JG_RS09340	-	2165552..2165785 (-)	234	WP_007052642.1	DUF3046 domain-containing protein	-
ACK2JG_RS09345	-	2165897..2166412 (-)	516	WP_007052641.1	helix-turn-helix domain-containing protein	-
ACK2JG_RS09350	-	2166472..2167005 (-)	534	WP_007052640.1	CinA family protein	-
ACK2JG_RS09355	pgsA	2167017..2167667 (-)	651	WP_007054476.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 41800.56 Da
• Isoelectric Point: 5.8610

>NTDB_id=1081822 ACK2JG_RS09335 WP_007052644.1 2164058..2165251(-) (recA) [Bifidobacterium longum strain SFAD19]
MALETKPAKDPAAEDKHELDPKRKAALDTALAQVEKSFGKGSAMRLGDQPEQNVEVIPTGSLALDMALGIGGLPKGRIVE
IYGPESSGKTTLALHVVANAQKKGGVAAYIDAEHALDPAYARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVI
DSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRL
DIRRIQTLKNGDEAVGNRTRVKVVKNKMAPPFKSAEFDMLYGEGISREGSVIDMAQQVGVVKKSGSWFTYEGDQLGQGRE
KVRQFLKDNPAITEEIENKVKAEFGLIGSADQFAEDGEAAAAAAVSEAAAADVAKDSKAAAAPAAKTTRAKAGTAKA

Nucleotide

• Length: 1194 bp

>NTDB_id=1081822 ACK2JG_RS09335 WP_007052644.1 2164058..2165251(-) (recA) [Bifidobacterium longum strain SFAD19]
ATGGCACTTGAGACCAAGCCGGCCAAGGACCCGGCAGCCGAGGACAAGCACGAGCTCGATCCCAAGCGCAAGGCGGCGCT
GGACACCGCGCTGGCGCAGGTCGAGAAGAGTTTTGGCAAAGGTTCCGCAATGCGACTGGGCGACCAGCCCGAGCAGAACG
TCGAGGTGATTCCCACCGGTTCGTTGGCTCTCGATATGGCGCTCGGCATCGGCGGCCTACCCAAGGGCCGCATCGTGGAG
ATCTACGGCCCCGAATCATCCGGTAAGACCACGCTCGCATTGCATGTGGTGGCCAATGCCCAGAAGAAGGGCGGCGTGGC
GGCCTACATCGATGCCGAACACGCGCTCGACCCGGCCTACGCCCGCAAGCTCGGCGTGGACACCGACTCACTCATCGTCT
CCCAGCCGGATAACGGCGAGCAGGCCCTCGAAATCGCTGACATGCTGATTCGCTCCGGTGCGCTTGACGTCATCGTCATC
GACTCGGTCGCCGCTTTGGTGCCGAAGGCCGAAATCGAAGGCGAAATGGGAGACAGCCATGTTGGTTTGCAGGCCCGACT
CATGAGTCAGGCGCTGCGCAAGATGACCGGCGCGTTGGCTCAGGCCGGCACCACCGCCATCTTCATCAACCAGCTGCGTG
AGAAGATCGGCGTGTTCTTCGGCAACCCTGAAACCACCACCGGTGGTAAAGCTCTGAAGTTCTACGCCTCCGTGCGTCTC
GACATCCGCCGCATCCAGACCTTGAAGAACGGCGACGAAGCGGTGGGCAACCGCACGCGCGTCAAGGTGGTCAAGAACAA
GATGGCCCCGCCTTTCAAGTCCGCCGAATTCGACATGCTCTACGGTGAAGGCATTTCCCGTGAGGGCTCGGTGATCGACA
TGGCCCAGCAGGTTGGCGTGGTCAAGAAGTCCGGTTCGTGGTTCACCTATGAGGGTGATCAGCTCGGTCAGGGACGAGAG
AAGGTCCGTCAGTTCCTTAAGGACAACCCGGCCATCACCGAGGAGATTGAGAACAAGGTCAAGGCCGAGTTCGGTCTGAT
CGGTTCCGCCGATCAGTTCGCGGAAGATGGCGAAGCCGCAGCAGCGGCCGCCGTCAGCGAGGCTGCTGCGGCTGACGTGG
CCAAGGACAGCAAGGCCGCAGCGGCGCCTGCTGCCAAAACGACCCGTGCCAAGGCCGGCACAGCTAAGGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (26-286)

3D structure

• AlphaFold DB: A0A0S2MDJ7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	65.465	83.879	0.549
recA	Acinetobacter baylyi ADP1	63.824	85.642	0.547
recA	Acinetobacter baumannii D1279779	64.653	83.375	0.539
recA	Streptococcus mitis NCTC 12261	59.718	89.421	0.534
recA	Neisseria gonorrhoeae MS11	64.242	83.123	0.534
recA	Neisseria gonorrhoeae MS11	64.242	83.123	0.534
recA	Neisseria gonorrhoeae strain FA1090	64.242	83.123	0.534
recA	Streptococcus mitis SK321	59.437	89.421	0.531
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.72	82.62	0.526
recA	Bacillus subtilis subsp. subtilis str. 168	64.506	81.612	0.526
recA	Ralstonia pseudosolanacearum GMI1000	66.454	78.841	0.524
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.236	83.375	0.519
recA	Vibrio cholerae O1 biovar El Tor strain E7946	63.777	81.36	0.519
recA	Vibrio cholerae strain A1552	63.777	81.36	0.519
recA	Glaesserella parasuis strain SC1401	63.75	80.605	0.514
recA	Streptococcus pneumoniae D39	59.824	85.894	0.514
recA	Streptococcus pneumoniae TIGR4	59.824	85.894	0.514
recA	Streptococcus pneumoniae Rx1	59.824	85.894	0.514
recA	Streptococcus pneumoniae R6	59.824	85.894	0.514
recA	Streptococcus mutans UA159	61.818	83.123	0.514
recA	Latilactobacillus sakei subsp. sakei 23K	62.154	81.864	0.509
recA	Lactococcus lactis subsp. cremoris KW2	61.212	83.123	0.509
recA	Streptococcus pyogenes NZ131	61.28	82.62	0.506
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.347	84.887	0.504
recA	Helicobacter pylori strain NCTC11637	60.671	82.62	0.501
recA	Helicobacter pylori 26695	60.671	82.62	0.501