Detailed information NTG1081369

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CLC19156_RS00765
• Genome accession: NZ_CP176598
• Coordinates: 125227..126264 (-)
• Length: 345 a.a.
• NCBI ID: WP_039617275.1
• Uniprot ID: Q93R37
• Organism: Campylobacter lari subsp. concheus strain RM19156
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 120227..131264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CLC19156_RS00730 (CLC19156_00142)	-	120602..120763 (+)	162	WP_257395650.1	highly acidic protein	-
CLC19156_RS00735 (CLC19156_00143)	-	120766..122076 (+)	1311	WP_220524225.1	MFS transporter	-
CLC19156_RS00740 (CLC19156_00144)	-	122045..122521 (-)	477	WP_220516147.1	cysteine permease	-
CLC19156_RS00745 (CLC19156_00145)	-	122634..123017 (+)	384	WP_220524223.1	group III truncated hemoglobin	-
CLC19156_RS00750 (CLC19156_00146)	-	123032..123715 (-)	684	WP_039667888.1	AMIN domain-containing protein	-
CLC19156_RS00755 (CLC19156_00147)	-	123705..123881 (-)	177	WP_173787953.1	hypothetical protein	-
CLC19156_RS00760 (CLC19156_00148)	eno	123983..125227 (-)	1245	WP_149061958.1	phosphopyruvate hydratase	-
CLC19156_RS00765 (CLC19156_00149)	recA	125227..126264 (-)	1038	WP_039617275.1	recombinase RecA	Machinery gene
CLC19156_RS00770 (CLC19156_00150)	-	126375..127238 (+)	864	WP_240385710.1	menaquinone biosynthesis family protein	-
CLC19156_RS00775 (CLC19156_00151)	fliQ	127265..127531 (+)	267	WP_012660903.1	flagellar biosynthesis protein FliQ	-
CLC19156_RS00780 (CLC19156_00152)	-	127528..128304 (+)	777	WP_257399397.1	UDP-N-acetylmuramate dehydrogenase	-
CLC19156_RS00785 (CLC19156_00153)	-	128297..128947 (-)	651	WP_257395647.1	hypothetical protein	-
CLC19156_RS00790 (CLC19156_00154)	-	128947..129705 (-)	759	WP_039667894.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-
CLC19156_RS00795 (CLC19156_00155)	-	129745..130923 (-)	1179	WP_052239414.1	sodium/hydrogen exchanger family protein	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37314.72 Da
• Isoelectric Point: 5.1908

>NTDB_id=1081369 CLC19156_RS00765 WP_039617275.1 125227..126264(-) (recA) [Campylobacter lari subsp. concheus strain RM19156]
MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEKIDSIPTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
ECQKKGGVCAFIDAEHALDVRYAKNLGVDTENLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGMMGYGTPETTTGGNALKFYASVRLDVRKTATLKQNDEPIGN
RVKVKVAKNKVAPPFKQAEFDVMFGEGVSREGELIDYGVKLDIIDKSGAWFSYKASKLGQGRENAKAFLKENPAIADEIT
QAIQNSIGIDSMILGAKEDDEEGEE

Nucleotide

• Length: 1038 bp

>NTDB_id=1081369 CLC19156_RS00765 WP_039617275.1 125227..126264(-) (recA) [Campylobacter lari subsp. concheus strain RM19156]
ATGGATGATAATAAAAGAAAATCACTTGATGCAGCTTTAAAAAGTCTTGATAAAACCTTTGGAAAAGGCACTATTTTAAG
ACTTGGCGATAAAGAAGTCGAAAAAATTGATTCTATTCCTACAGGTTCTGTTGGACTTGATTTAGCTTTAGGCATTGGTG
GGGTTCCAAAAGGAAGAATTATAGAAATTTACGGACCTGAAAGTTCAGGTAAAACTACACTTACCTTACACATCATAGCA
GAATGTCAAAAAAAAGGCGGAGTTTGTGCGTTTATAGATGCTGAACACGCTCTTGATGTAAGATATGCAAAAAATTTAGG
TGTTGATACAGAAAATCTTTATATCTCTCAACCAGATTTTGGAGAGCAAGCTTTAGAAATCGTTGAAACTATAGCAAGAA
GTGGAGCTATTGATCTAATAGTAGTAGATAGTGTTGCTGCACTTACTCCAAAAGCAGAAATTGAAGGTGATATGGGAGAT
CAACATGTAGGTCTTCAAGCAAGATTAATGAGCCAAGCTTTAAGAAAATTAACCGGTATCGTTCATAAAATGAACACTAC
TGTAATTTTCATCAACCAAATTCGTATGAAAATAGGTATGATGGGTTATGGAACACCTGAAACAACTACCGGTGGAAATG
CTTTAAAATTTTATGCTTCAGTGCGTTTAGATGTAAGAAAAACAGCTACTTTAAAACAAAATGATGAGCCTATTGGAAAC
CGTGTTAAGGTAAAAGTGGCTAAAAATAAAGTAGCCCCTCCTTTTAAACAGGCTGAATTTGATGTGATGTTTGGTGAGGG
TGTAAGTCGCGAAGGTGAACTAATAGACTATGGTGTAAAACTTGATATTATTGATAAAAGTGGCGCATGGTTTTCTTACA
AGGCCTCTAAACTTGGCCAAGGCAGAGAAAACGCCAAAGCTTTTTTAAAAGAAAATCCAGCTATTGCAGATGAAATTACT
CAAGCTATACAAAACTCAATCGGTATAGATAGTATGATTTTGGGTGCAAAAGAAGACGATGAAGAAGGAGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: Q93R37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.304	100	0.913
recA	Helicobacter pylori 26695	78.743	96.812	0.762
recA	Helicobacter pylori strain NCTC11637	78.443	96.812	0.759
recA	Neisseria gonorrhoeae MS11	64.638	100	0.646
recA	Neisseria gonorrhoeae MS11	64.638	100	0.646
recA	Neisseria gonorrhoeae strain FA1090	64.638	100	0.646
recA	Acinetobacter baylyi ADP1	62.5	99.71	0.623
recA	Glaesserella parasuis strain SC1401	62.682	99.42	0.623
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.157	96.232	0.617
recA	Acinetobacter baumannii D1279779	64.22	94.783	0.609
recA	Pseudomonas stutzeri DSM 10701	63.142	95.942	0.606
recA	Ralstonia pseudosolanacearum GMI1000	63.333	95.652	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	63.415	95.072	0.603
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.654	93.913	0.588
recA	Vibrio cholerae strain A1552	62.654	93.913	0.588
recA	Streptococcus pyogenes NZ131	59.394	95.652	0.568
recA	Streptococcus mitis NCTC 12261	58.663	95.362	0.559
recA	Streptococcus pneumoniae Rx1	58.359	95.362	0.557
recA	Streptococcus pneumoniae D39	58.359	95.362	0.557
recA	Streptococcus pneumoniae R6	58.359	95.362	0.557
recA	Streptococcus pneumoniae TIGR4	58.359	95.362	0.557
recA	Streptococcus mitis SK321	58.055	95.362	0.554
recA	Streptococcus mutans UA159	57.704	95.942	0.554
recA	Latilactobacillus sakei subsp. sakei 23K	57.798	94.783	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.143	95.362	0.545
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.79	93.913	0.533