Detailed information NTG1081242

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: UPTC15610_RS00820
• Genome accession: NZ_CP176591
• Coordinates: 138077..139114 (-)
• Length: 345 a.a.
• NCBI ID: WP_039617275.1
• Uniprot ID: Q93R37
• Organism: Campylobacter lari strain RM15610
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 133077..144114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UPTC15610_RS00780 (UPTC15610_00150)	-	133408..133671 (-)	264	WP_087685290.1	DUF493 family protein	-
UPTC15610_RS00785 (UPTC15610_00151)	moaC	133649..134122 (-)	474	WP_214115548.1	cyclic pyranopterin monophosphate synthase MoaC	-
UPTC15610_RS00790 (UPTC15610_00152)	-	134210..134359 (+)	150	WP_039640590.1	highly acidic protein	-
UPTC15610_RS00795 (UPTC15610_00153)	-	134901..135377 (-)	477	WP_214115547.1	cysteine permease	-
UPTC15610_RS00800 (UPTC15610_00154)	-	135484..135867 (+)	384	WP_214115546.1	group III truncated hemoglobin	-
UPTC15610_RS00805 (UPTC15610_00155)	-	135882..136565 (-)	684	WP_214115545.1	AMIN domain-containing protein	-
UPTC15610_RS00810 (UPTC15610_00156)	-	136555..136758 (-)	204	WP_047207897.1	hypothetical protein	-
UPTC15610_RS00815 (UPTC15610_00157)	eno	136833..138077 (-)	1245	WP_047207898.1	phosphopyruvate hydratase	-
UPTC15610_RS00820 (UPTC15610_00158)	recA	138077..139114 (-)	1038	WP_039617275.1	recombinase RecA	Machinery gene
UPTC15610_RS00825 (UPTC15610_00159)	-	139225..140088 (+)	864	WP_214115544.1	menaquinone biosynthesis family protein	-
UPTC15610_RS00830 (UPTC15610_00160)	fliQ	140116..140382 (+)	267	WP_012660903.1	flagellar biosynthesis protein FliQ	-
UPTC15610_RS00835 (UPTC15610_00161)	-	140379..141155 (+)	777	WP_214115543.1	UDP-N-acetylmuramate dehydrogenase	-
UPTC15610_RS00840 (UPTC15610_00162)	-	141148..141798 (-)	651	WP_257914411.1	hypothetical protein	-
UPTC15610_RS00845 (UPTC15610_00163)	-	141798..142556 (-)	759	WP_214098045.1	3'(2'),5'-bisphosphate nucleotidase CysQ	-
UPTC15610_RS00850 (UPTC15610_00164)	-	142596..143774 (-)	1179	WP_214115541.1	cation:proton antiporter	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37314.72 Da
• Isoelectric Point: 5.1908

>NTDB_id=1081242 UPTC15610_RS00820 WP_039617275.1 138077..139114(-) (recA) [Campylobacter lari strain RM15610]
MDDNKRKSLDAALKSLDKTFGKGTILRLGDKEVEKIDSIPTGSVGLDLALGIGGVPKGRIIEIYGPESSGKTTLTLHIIA
ECQKKGGVCAFIDAEHALDVRYAKNLGVDTENLYISQPDFGEQALEIVETIARSGAIDLIVVDSVAALTPKAEIEGDMGD
QHVGLQARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGMMGYGTPETTTGGNALKFYASVRLDVRKTATLKQNDEPIGN
RVKVKVAKNKVAPPFKQAEFDVMFGEGVSREGELIDYGVKLDIIDKSGAWFSYKASKLGQGRENAKAFLKENPAIADEIT
QAIQNSIGIDSMILGAKEDDEEGEE

Nucleotide

• Length: 1038 bp

>NTDB_id=1081242 UPTC15610_RS00820 WP_039617275.1 138077..139114(-) (recA) [Campylobacter lari strain RM15610]
ATGGATGATAATAAAAGAAAATCACTTGATGCAGCTTTAAAAAGTCTTGATAAAACCTTTGGAAAAGGCACTATCTTAAG
ACTTGGTGATAAAGAAGTTGAAAAGATTGATTCTATTCCTACAGGTTCAGTTGGGCTAGATTTAGCTCTAGGTATAGGTG
GGGTACCAAAAGGAAGAATTATAGAAATTTATGGACCTGAAAGCTCAGGTAAAACCACTCTTACCTTACACATCATAGCA
GAATGCCAAAAAAAAGGTGGAGTTTGTGCATTTATCGATGCTGAGCACGCACTAGATGTAAGATATGCAAAGAATTTAGG
TGTTGATACAGAAAATCTTTACATCTCTCAGCCAGATTTTGGCGAGCAAGCTTTAGAAATCGTTGAAACTATAGCAAGAA
GTGGAGCTATTGATCTAATAGTAGTAGATAGCGTTGCCGCACTTACTCCAAAAGCAGAAATTGAAGGTGATATGGGGGAT
CAGCATGTAGGTCTTCAAGCAAGATTAATGAGTCAAGCTTTAAGAAAACTCACCGGTATTGTCCATAAAATGAACACTAC
TGTAATTTTCATCAATCAAATTCGTATGAAAATAGGCATGATGGGCTATGGCACTCCTGAAACAACAACTGGCGGAAATG
CTTTAAAATTTTATGCTTCAGTGCGTTTAGATGTAAGAAAAACAGCCACTTTAAAACAAAATGATGAGCCTATTGGAAAC
CGTGTTAAAGTAAAAGTAGCCAAAAATAAAGTAGCTCCTCCTTTTAAACAAGCTGAATTTGATGTGATGTTTGGTGAGGG
TGTAAGCCGTGAGGGTGAGTTAATAGACTATGGTGTAAAACTTGATATTATTGATAAAAGCGGTGCGTGGTTTTCTTACA
AGGCTTCTAAACTTGGTCAAGGTAGAGAAAATGCTAAAGCCTTTTTAAAAGAAAACCCAGCTATTGCAGATGAAATCACT
CAGGCTATACAAAACTCAATCGGTATAGATAGTATGATTTTGGGTGCAAAAGAAGACGATGAAGAAGGAGAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: Q93R37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.304	100	0.913
recA	Helicobacter pylori 26695	78.743	96.812	0.762
recA	Helicobacter pylori strain NCTC11637	78.443	96.812	0.759
recA	Neisseria gonorrhoeae MS11	64.638	100	0.646
recA	Neisseria gonorrhoeae MS11	64.638	100	0.646
recA	Neisseria gonorrhoeae strain FA1090	64.638	100	0.646
recA	Acinetobacter baylyi ADP1	62.5	99.71	0.623
recA	Glaesserella parasuis strain SC1401	62.682	99.42	0.623
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.157	96.232	0.617
recA	Acinetobacter baumannii D1279779	64.22	94.783	0.609
recA	Pseudomonas stutzeri DSM 10701	63.142	95.942	0.606
recA	Ralstonia pseudosolanacearum GMI1000	63.333	95.652	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	63.415	95.072	0.603
recA	Vibrio cholerae O1 biovar El Tor strain E7946	62.654	93.913	0.588
recA	Vibrio cholerae strain A1552	62.654	93.913	0.588
recA	Streptococcus pyogenes NZ131	59.394	95.652	0.568
recA	Streptococcus mitis NCTC 12261	58.663	95.362	0.559
recA	Streptococcus pneumoniae Rx1	58.359	95.362	0.557
recA	Streptococcus pneumoniae D39	58.359	95.362	0.557
recA	Streptococcus pneumoniae R6	58.359	95.362	0.557
recA	Streptococcus pneumoniae TIGR4	58.359	95.362	0.557
recA	Streptococcus mitis SK321	58.055	95.362	0.554
recA	Streptococcus mutans UA159	57.704	95.942	0.554
recA	Latilactobacillus sakei subsp. sakei 23K	57.798	94.783	0.548
recA	Lactococcus lactis subsp. cremoris KW2	57.143	95.362	0.545
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.79	93.913	0.533