Detailed information NTG1080310

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACK0E4_RS04155
• Genome accession: NZ_CP176474
• Coordinates: 871840..872901 (+)
• Length: 353 a.a.
• NCBI ID: WP_003587498.1
• Uniprot ID: A0A829GV21
• Organism: Lacticaseibacillus paracasei strain BBM397
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 866840..877901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK0E4_RS04135	ymfI	867766..868494 (+)	729	WP_003569514.1	elongation factor P 5-aminopentanone reductase	-
ACK0E4_RS04140	-	868581..869510 (+)	930	WP_003569516.1	helix-turn-helix domain-containing protein	-
ACK0E4_RS04145	pgsA	869507..870100 (+)	594	WP_003564171.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
ACK0E4_RS04150	cinA	870542..871783 (+)	1242	WP_003578250.1	competence/damage-inducible protein A	Machinery gene
ACK0E4_RS04155	recA	871840..872901 (+)	1062	WP_003587498.1	recombinase RecA	Machinery gene
ACK0E4_RS04160	rny	873196..874767 (+)	1572	WP_003657913.1	ribonuclease Y	-
ACK0E4_RS04165	-	874861..875511 (-)	651	WP_003657915.1	YigZ family protein	-
ACK0E4_RS04170	-	875539..876801 (+)	1263	WP_218210303.1	helicase-related protein	-
ACK0E4_RS04175	-	877014..877475 (+)	462	WP_411165734.1	ComF family protein	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37705.92 Da
• Isoelectric Point: 5.5536

>NTDB_id=1080310 ACK0E4_RS04155 WP_003587498.1 871840..872901(+) (recA) [Lacticaseibacillus paracasei strain BBM397]
MAGDERQKALDVALKKIEKNFGKGAIMRMGAKADTRVSVVSSGSLAVDDALGVGGFPRGRIVEIYGPESSGKTTVALHAV
AEVQKQGGTAAYIDAENAMDPKYATALGVNIDELLLSQPDTGEQGLEIADELVASGAIDIVVIDSVAALVPRAEIEGDMG
DAHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGIIFGSPETTPGGRALKFYATVRLEIRRSEQIKTGADVVGN
RTKIKVVKNKVAPPFRTAIVDIMYGQGISQTGELVDMAVERDIVEKAGSWYAYQGERIGQGRENAKTYLDNHADLQQTIK
QQVRVAYGMAAAPGRETASVSEDQPEIPQQAEV

Nucleotide

• Length: 1062 bp

>NTDB_id=1080310 ACK0E4_RS04155 WP_003587498.1 871840..872901(+) (recA) [Lacticaseibacillus paracasei strain BBM397]
ATGGCAGGAGACGAACGCCAGAAAGCATTGGATGTTGCACTGAAAAAGATTGAAAAAAATTTTGGTAAAGGCGCGATTAT
GCGAATGGGTGCTAAGGCGGACACGCGCGTTTCCGTTGTCTCTAGCGGCTCACTTGCCGTTGATGATGCACTTGGTGTTG
GGGGCTTTCCGCGCGGACGAATTGTCGAAATTTATGGACCGGAAAGTTCCGGCAAAACAACCGTCGCGCTGCATGCTGTT
GCTGAAGTGCAGAAGCAAGGCGGTACTGCCGCCTATATTGATGCCGAGAATGCGATGGATCCCAAGTACGCAACTGCTTT
GGGCGTCAATATTGACGAATTATTGCTCTCCCAGCCAGACACAGGCGAACAAGGGCTGGAGATTGCTGATGAACTAGTCG
CGTCTGGTGCCATTGATATTGTGGTGATTGATTCAGTTGCTGCTTTGGTGCCGCGGGCTGAGATTGAGGGCGATATGGGG
GATGCCCATGTTGGCTTGCAAGCCCGATTAATGTCACAGGCGTTACGTAAGTTATCCGGTTCCATCAATAAGACAAAAAC
GATTGCTTTATTCATTAATCAGATTCGTGAGAAAGTCGGGATCATTTTTGGGAGTCCGGAAACGACACCAGGTGGTCGTG
CCTTGAAGTTTTATGCGACTGTTCGGTTAGAGATCCGGCGGTCGGAACAGATCAAGACAGGCGCAGATGTCGTCGGCAAT
CGCACTAAAATCAAAGTGGTCAAGAATAAGGTGGCACCGCCTTTTCGAACAGCAATTGTGGATATCATGTATGGCCAAGG
CATTTCGCAAACTGGCGAACTTGTCGACATGGCAGTTGAGAGAGATATTGTTGAAAAAGCAGGGTCATGGTACGCGTATC
AAGGTGAACGCATCGGCCAAGGTCGCGAAAACGCTAAGACATATCTTGATAACCACGCTGATCTTCAGCAGACGATTAAA
CAACAGGTTCGCGTGGCTTATGGTATGGCAGCCGCACCTGGTCGGGAGACGGCTTCGGTCAGTGAAGATCAACCCGAAAT
ACCTCAACAGGCTGAAGTATGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

3D structure

• AlphaFold DB: A0A829GV21

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	78.963	98.3	0.776
recA	Bacillus subtilis subsp. subtilis str. 168	74.154	92.068	0.683
recA	Streptococcus mutans UA159	67.919	98.017	0.666
recA	Streptococcus mitis NCTC 12261	67.919	98.017	0.666
recA	Streptococcus mitis SK321	67.919	98.017	0.666
recA	Streptococcus pyogenes NZ131	70.606	93.484	0.66
recA	Streptococcus pneumoniae Rx1	69.486	93.768	0.652
recA	Streptococcus pneumoniae D39	69.486	93.768	0.652
recA	Streptococcus pneumoniae R6	69.486	93.768	0.652
recA	Streptococcus pneumoniae TIGR4	69.486	93.768	0.652
recA	Lactococcus lactis subsp. cremoris KW2	68.882	93.768	0.646
recA	Ralstonia pseudosolanacearum GMI1000	65.495	88.669	0.581
recA	Neisseria gonorrhoeae MS11	62.385	92.635	0.578
recA	Neisseria gonorrhoeae MS11	62.385	92.635	0.578
recA	Neisseria gonorrhoeae strain FA1090	62.385	92.635	0.578
recA	Acinetobacter baylyi ADP1	58.43	97.45	0.569
recA	Pseudomonas stutzeri DSM 10701	58.529	96.317	0.564
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.3	91.501	0.561
recA	Acinetobacter baumannii D1279779	61.059	90.935	0.555
recA	Glaesserella parasuis strain SC1401	54.83	99.717	0.547
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	59.021	92.635	0.547
recA	Helicobacter pylori strain NCTC11637	58.182	93.484	0.544
recA	Helicobacter pylori 26695	58.182	93.484	0.544
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.19	90.935	0.538
recA	Vibrio cholerae strain A1552	59.19	90.935	0.538
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.269	92.635	0.521