Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ACI514_RS19305 | Genome accession | NZ_CP173611 |
| Coordinates | 4338515..4339570 (-) | Length | 351 a.a. |
| NCBI ID | WP_007908746.1 | Uniprot ID | J3FUG2 |
| Organism | Pseudomonas sp. M20 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4338036..4379488 | 4338515..4339570 | within | 0 |
Gene organization within MGE regions
Location: 4338036..4379488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI514_RS19300 (ACI514_19285) | recX | 4338036..4338506 (-) | 471 | WP_160056309.1 | recombination regulator RecX | - |
| ACI514_RS19305 (ACI514_19290) | recA | 4338515..4339570 (-) | 1056 | WP_007908746.1 | recombinase RecA | Machinery gene |
| ACI514_RS19310 (ACI514_19295) | - | 4339654..4340154 (-) | 501 | WP_160056307.1 | CinA family protein | - |
| ACI514_RS19315 (ACI514_19300) | - | 4340222..4340740 (-) | 519 | WP_160056305.1 | lysis system i-spanin subunit Rz | - |
| ACI514_RS19320 (ACI514_19305) | - | 4340719..4341285 (-) | 567 | WP_160056303.1 | glycoside hydrolase family 19 protein | - |
| ACI514_RS19325 (ACI514_19310) | - | 4341322..4341576 (-) | 255 | WP_405122219.1 | hypothetical protein | - |
| ACI514_RS19330 (ACI514_19315) | - | 4341576..4342736 (-) | 1161 | WP_160056299.1 | hypothetical protein | - |
| ACI514_RS19335 (ACI514_19320) | - | 4342746..4343186 (-) | 441 | WP_405122220.1 | phage tail assembly chaperone | - |
| ACI514_RS19340 (ACI514_19325) | - | 4343189..4344109 (-) | 921 | WP_160056295.1 | phage tail protein | - |
| ACI514_RS19345 (ACI514_19330) | - | 4344231..4344797 (-) | 567 | WP_160056293.1 | tail fiber assembly protein | - |
| ACI514_RS19350 (ACI514_19335) | - | 4344805..4345902 (-) | 1098 | WP_160056291.1 | phage tail protein | - |
| ACI514_RS19355 (ACI514_19340) | - | 4346042..4346557 (-) | 516 | WP_160056289.1 | phage tail protein | - |
| ACI514_RS19360 (ACI514_19345) | - | 4346554..4347711 (-) | 1158 | WP_160056287.1 | phage tail protein | - |
| ACI514_RS19365 (ACI514_19350) | - | 4347725..4348324 (-) | 600 | WP_034154917.1 | YmfQ family protein | - |
| ACI514_RS19370 (ACI514_19355) | - | 4348312..4349358 (-) | 1047 | WP_160056285.1 | baseplate J/gp47 family protein | - |
| ACI514_RS19375 (ACI514_19360) | - | 4349348..4349746 (-) | 399 | WP_003222234.1 | phage GP46 family protein | - |
| ACI514_RS19380 (ACI514_19365) | - | 4349746..4350255 (-) | 510 | WP_110720163.1 | phage baseplate assembly protein V | - |
| ACI514_RS19385 (ACI514_19370) | - | 4350396..4351439 (-) | 1044 | WP_405122221.1 | phage baseplate assembly protein | - |
| ACI514_RS19390 (ACI514_19375) | - | 4351443..4352678 (-) | 1236 | WP_160056281.1 | DNA circularization protein | - |
| ACI514_RS19395 (ACI514_19380) | - | 4352665..4354650 (-) | 1986 | WP_405122222.1 | hypothetical protein | - |
| ACI514_RS19400 (ACI514_19385) | - | 4354781..4355077 (-) | 297 | WP_007908778.1 | phage tail assembly protein | - |
| ACI514_RS19405 (ACI514_19390) | - | 4355074..4355421 (-) | 348 | WP_007908779.1 | phage tail tube protein | - |
| ACI514_RS19410 (ACI514_19395) | - | 4355489..4356985 (-) | 1497 | WP_160056277.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| ACI514_RS19415 (ACI514_19400) | - | 4356985..4357164 (-) | 180 | WP_093436496.1 | DUF2635 domain-containing protein | - |
| ACI514_RS19420 (ACI514_19405) | - | 4357161..4357745 (-) | 585 | WP_405122223.1 | hypothetical protein | - |
| ACI514_RS19425 (ACI514_19410) | - | 4357888..4358919 (-) | 1032 | WP_405122224.1 | phage late control D family protein | - |
| ACI514_RS19430 (ACI514_19415) | - | 4358929..4359141 (-) | 213 | WP_064393145.1 | tail protein X | - |
| ACI514_RS19435 (ACI514_19420) | - | 4359134..4359517 (-) | 384 | WP_160056271.1 | phage tail protein | - |
| ACI514_RS19440 (ACI514_19425) | - | 4359517..4361880 (-) | 2364 | WP_405122225.1 | phage tail tape measure protein | - |
| ACI514_RS19445 (ACI514_19430) | - | 4362033..4362614 (-) | 582 | WP_160056267.1 | phage tail assembly protein | - |
| ACI514_RS19450 (ACI514_19435) | - | 4362783..4363289 (-) | 507 | WP_160056265.1 | phage major tail tube protein | - |
| ACI514_RS19455 (ACI514_19440) | - | 4363289..4364455 (-) | 1167 | WP_034154903.1 | tail protein | - |
| ACI514_RS19460 (ACI514_19445) | - | 4364458..4364643 (-) | 186 | WP_007908808.1 | hypothetical protein | - |
| ACI514_RS19465 (ACI514_19450) | - | 4364802..4365380 (-) | 579 | WP_405122226.1 | hypothetical protein | - |
| ACI514_RS19470 (ACI514_19455) | - | 4365390..4367006 (-) | 1617 | WP_405122227.1 | phage tail protein | - |
| ACI514_RS19475 (ACI514_19460) | - | 4367007..4367642 (-) | 636 | WP_160056257.1 | phage tail protein I | - |
| ACI514_RS19480 (ACI514_19465) | - | 4367639..4368634 (-) | 996 | WP_160056255.1 | baseplate J/gp47 family protein | - |
| ACI514_RS19485 (ACI514_19470) | - | 4368631..4368963 (-) | 333 | WP_160056253.1 | phage baseplate protein | - |
| ACI514_RS19490 (ACI514_19475) | - | 4368978..4369586 (-) | 609 | WP_160056251.1 | phage baseplate assembly protein V | - |
| ACI514_RS19495 (ACI514_19480) | - | 4369590..4370111 (-) | 522 | WP_160056249.1 | hypothetical protein | - |
| ACI514_RS19500 (ACI514_19485) | - | 4370183..4370521 (-) | 339 | WP_160056247.1 | phage holin family protein | - |
| ACI514_RS19505 (ACI514_19490) | - | 4370662..4371084 (-) | 423 | WP_405122228.1 | tail fiber assembly protein | - |
| ACI514_RS19510 (ACI514_19495) | - | 4371135..4371539 (-) | 405 | WP_160056243.1 | tail fiber assembly protein | - |
| ACI514_RS19515 (ACI514_19500) | - | 4372057..4372791 (-) | 735 | WP_007908821.1 | XRE family transcriptional regulator | - |
| ACI514_RS19520 (ACI514_19505) | mutS | 4373003..4375585 (+) | 2583 | WP_405122229.1 | DNA mismatch repair protein MutS | - |
| ACI514_RS19525 (ACI514_19510) | fdxA | 4375749..4376072 (+) | 324 | WP_008077096.1 | ferredoxin FdxA | - |
| ACI514_RS19530 (ACI514_19515) | rpoS | 4376600..4377610 (-) | 1011 | WP_016985073.1 | RNA polymerase sigma factor RpoS | - |
| ACI514_RS19535 (ACI514_19520) | - | 4377717..4378598 (-) | 882 | WP_160056239.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| ACI514_RS19540 (ACI514_19525) | - | 4378811..4379446 (-) | 636 | WP_171057346.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37404.95 Da Isoelectric Point: 5.3111
>NTDB_id=1073155 ACI514_RS19305 WP_007908746.1 4338515..4339570(-) (recA) [Pseudomonas sp. M20]
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQGKANSAKFLADNPEIAAKLEK
QLRDKLLTPAVIDSKASAVKETEDDLADADI
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQGKANSAKFLADNPEIAAKLEK
QLRDKLLTPAVIDSKASAVKETEDDLADADI
Nucleotide
Download Length: 1056 bp
>NTDB_id=1073155 ACI514_RS19305 WP_007908746.1 4338515..4339570(-) (recA) [Pseudomonas sp. M20]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTGATGCG
TATGGGCGATCAGGACCGTCAGGCGATCCCGGCTATCTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GACTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCCTCCGGTAAAACCACACTGACACTGTCGGTGATCGCC
CAGGCGCAAAAAGCCGGCGCGACCTGCGCATTCGTCGACGCCGAACACGCCCTCGATCCTGAGTACGCCGGCAAGTTGGG
CGTTAACGTCGACGACCTGCTGGTGTCCCAGCCGGACACCGGTGAACAGGCGCTGGAAATCACCGACATGCTGGTGCGTT
CCAACGCCGTTGACGTGATCATCGTCGACTCCGTAGCTGCACTGGTGCCGAAGGCTGAAATCGAAGGCGAAATGGGTGAC
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTCGACATCCGCCGTACCGGCGCGGTGAAAGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGGTTGTGAAGAACAAGGTCGCTTCGCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGCAAAGGCAT
CTACCTCAATGGCGAGATGATCGACCTGGGTGTGCTGCACGGTTTCGTCGAGAAGTCCGGCGCATGGTATGCCTACGAAG
GCACCAAGATCGGTCAGGGCAAGGCTAACTCGGCCAAGTTCCTGGCAGACAATCCGGAAATCGCCGCGAAGCTTGAGAAG
CAACTTCGTGACAAGCTGCTTACTCCAGCAGTGATCGACTCCAAGGCCTCTGCAGTCAAAGAGACTGAAGACGACCTGGC
CGACGCTGACATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTGATGCG
TATGGGCGATCAGGACCGTCAGGCGATCCCGGCTATCTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GACTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCCTCCGGTAAAACCACACTGACACTGTCGGTGATCGCC
CAGGCGCAAAAAGCCGGCGCGACCTGCGCATTCGTCGACGCCGAACACGCCCTCGATCCTGAGTACGCCGGCAAGTTGGG
CGTTAACGTCGACGACCTGCTGGTGTCCCAGCCGGACACCGGTGAACAGGCGCTGGAAATCACCGACATGCTGGTGCGTT
CCAACGCCGTTGACGTGATCATCGTCGACTCCGTAGCTGCACTGGTGCCGAAGGCTGAAATCGAAGGCGAAATGGGTGAC
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTCGACATCCGCCGTACCGGCGCGGTGAAAGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGGTTGTGAAGAACAAGGTCGCTTCGCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGCAAAGGCAT
CTACCTCAATGGCGAGATGATCGACCTGGGTGTGCTGCACGGTTTCGTCGAGAAGTCCGGCGCATGGTATGCCTACGAAG
GCACCAAGATCGGTCAGGGCAAGGCTAACTCGGCCAAGTTCCTGGCAGACAATCCGGAAATCGCCGCGAAGCTTGAGAAG
CAACTTCGTGACAAGCTGCTTACTCCAGCAGTGATCGACTCCAAGGCCTCTGCAGTCAAAGAGACTGAAGACGACCTGGC
CGACGCTGACATCTGA
Similar proteins
Only experimentally validated proteins are listed.