Detailed information NTG1061196

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACGEDC_RS02930
• Genome accession: NZ_CP171406
• Coordinates: 629317..630375 (-)
• Length: 352 a.a.
• NCBI ID: WP_055023779.1
• Uniprot ID: A0A0Q0PAG5
• Organism: Shewanella sp. WPAGA9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 624317..635375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGEDC_RS02920	csrA	625663..625863 (-)	201	WP_055023781.1	carbon storage regulator CsrA	-
ACGEDC_RS02925	alaS	626364..628988 (-)	2625	WP_394496337.1	alanine--tRNA ligase	-
ACGEDC_RS02930	recA	629317..630375 (-)	1059	WP_055023779.1	recombinase RecA	Machinery gene
ACGEDC_RS02935	mutS	630796..633375 (+)	2580	WP_394496339.1	DNA mismatch repair protein MutS	-
ACGEDC_RS02940	-	633463..633870 (-)	408	WP_055023777.1	hypothetical protein	-
ACGEDC_RS02945	rpoS	633963..634943 (-)	981	WP_055023776.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37611.01 Da
• Isoelectric Point: 4.9477

>NTDB_id=1061196 ACGEDC_RS02930 WP_055023779.1 629317..630375(-) (recA) [Shewanella sp. WPAGA9]
MKADPNKEKALNAVLGQIEKQFGKGSIMKLGADRTMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKNLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDAVVG
NETRVKVVKNKIAAPFRQAEFQILYGKGINRTGELVDLGVAHKLVEKAGAWYSYQGNKIGQGRANAGKYLVENPAVAEEI
EANLRQMLLSTEKEAAPAESDENIDLETGEVF

Nucleotide

• Length: 1059 bp

>NTDB_id=1061196 ACGEDC_RS02930 WP_055023779.1 629317..630375(-) (recA) [Shewanella sp. WPAGA9]
ATGAAAGCAGATCCAAATAAAGAGAAAGCGCTGAATGCTGTATTAGGTCAAATTGAAAAGCAATTTGGTAAAGGTTCAAT
CATGAAGTTGGGCGCTGATCGCACAATGGATGTTGAAACCATTTCTACAGGTTCGCTTTCGTTGGATGTTGCCTTAGGTG
CTGGTGGTTTACCAATGGGACGTATCGTTGAAATTTACGGTCCAGAATCATCGGGTAAAACAACGTTAACACTTGAAGTT
ATTGCTGCAGCACAACGTGAAGGCAAAACGTGTGCGTTTATTGATGCTGAGCATGCTCTAGACCCTATCTATGCAAAAAA
TCTAGGTGTCGATATTGATAACCTATTATGTTCACAACCTGATACTGGTGAGCAAGCGCTTGAAATCTGTGATGCGCTAA
CACGTTCAGGTGCTGTTGATGTAATTATTGTCGATTCTGTTGCAGCATTAACACCAAAAGCTGAAATTGAAGGTGAAATT
GGTGATTCTCATATGGGCCTTGCCGCACGTATGATGAGCCAAGCAATGCGTAAGCTTGCAGGTAACTTAAAACAGTCAAA
TACGCTACTTATTTTCATTAACCAAATTCGTATGAAAATTGGTGTTATGTTTGGTAACCCTGAAACCACAACGGGTGGTA
ATGCACTTAAATTCTACGCTTCTGTACGTTTAGATATTCGTCGTACAGGTGCTATTAAAGACGGCGATGCTGTCGTAGGT
AACGAGACTCGAGTAAAGGTCGTTAAAAATAAAATTGCAGCGCCATTTAGACAAGCTGAATTCCAAATTCTTTACGGTAA
AGGTATTAACCGTACTGGTGAGCTCGTTGATTTAGGTGTAGCACACAAGCTGGTTGAGAAAGCTGGTGCTTGGTACAGCT
ACCAAGGCAACAAGATTGGTCAAGGCCGCGCAAATGCGGGGAAATACCTAGTTGAAAACCCTGCAGTAGCAGAAGAAATT
GAAGCAAATTTACGTCAAATGCTATTAAGCACTGAAAAAGAAGCGGCACCAGCTGAGTCGGATGAAAACATCGATTTAGA
AACAGGTGAAGTGTTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A0A0Q0PAG5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae O1 biovar El Tor strain E7946	79.656	99.148	0.79
recA	Vibrio cholerae strain A1552	79.656	99.148	0.79
recA	Pseudomonas stutzeri DSM 10701	73.235	96.591	0.707
recA	Acinetobacter baylyi ADP1	70.725	98.011	0.693
recA	Acinetobacter baumannii D1279779	71.091	96.307	0.685
recA	Glaesserella parasuis strain SC1401	68.895	97.727	0.673
recA	Ralstonia pseudosolanacearum GMI1000	71.061	88.352	0.628
recA	Neisseria gonorrhoeae MS11	67.492	91.761	0.619
recA	Neisseria gonorrhoeae MS11	67.492	91.761	0.619
recA	Neisseria gonorrhoeae strain FA1090	67.492	91.761	0.619
recA	Streptococcus mitis SK321	60.704	96.875	0.588
recA	Streptococcus mitis NCTC 12261	60.117	96.875	0.582
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60	96.591	0.58
recA	Streptococcus pneumoniae TIGR4	59.531	96.875	0.577
recA	Streptococcus pneumoniae Rx1	59.531	96.875	0.577
recA	Streptococcus pneumoniae D39	59.531	96.875	0.577
recA	Streptococcus pneumoniae R6	59.531	96.875	0.577
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.661	94.602	0.574
recA	Helicobacter pylori strain NCTC11637	60.18	94.886	0.571
recA	Helicobacter pylori 26695	59.88	94.886	0.568
recA	Latilactobacillus sakei subsp. sakei 23K	57.225	98.295	0.562
recA	Bacillus subtilis subsp. subtilis str. 168	61.371	91.193	0.56
recA	Streptococcus pyogenes NZ131	60.681	91.761	0.557
recA	Streptococcus mutans UA159	60.062	91.761	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.635	89.489	0.543
recA	Lactococcus lactis subsp. cremoris KW2	58.824	91.761	0.54