Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   ACF8MK_RS15790 Genome accession   NZ_CP171154
Coordinates   3622259..3623305 (-) Length   348 a.a.
NCBI ID   WP_028381962.1    Uniprot ID   A0A0W0S741
Organism   Legionella sp. 227     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3617259..3628305
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF8MK_RS15765 (ACF8MK_15765) - 3617394..3618116 (+) 723 WP_392537453.1 SDR family NAD(P)-dependent oxidoreductase -
  ACF8MK_RS15770 (ACF8MK_15770) - 3618200..3618397 (-) 198 WP_265702445.1 Thivi_2564 family membrane protein -
  ACF8MK_RS15775 (ACF8MK_15775) mscL 3618591..3618980 (-) 390 WP_265702447.1 large-conductance mechanosensitive channel protein MscL -
  ACF8MK_RS15780 (ACF8MK_15780) alaS 3619049..3621631 (-) 2583 WP_392537454.1 alanine--tRNA ligase -
  ACF8MK_RS15785 (ACF8MK_15785) recX 3621826..3622266 (-) 441 WP_392537455.1 recombination regulator RecX -
  ACF8MK_RS15790 (ACF8MK_15790) recA 3622259..3623305 (-) 1047 WP_028381962.1 recombinase RecA Machinery gene
  ACF8MK_RS15795 (ACF8MK_15795) - 3623569..3624390 (-) 822 WP_392537456.1 hypothetical protein -
  ACF8MK_RS15800 (ACF8MK_15800) - 3624539..3625024 (-) 486 WP_392537457.1 CinA family protein -
  ACF8MK_RS15805 (ACF8MK_15805) - 3625080..3625247 (-) 168 WP_265702454.1 hypothetical protein -
  ACF8MK_RS15810 (ACF8MK_15810) - 3625371..3626072 (-) 702 WP_392537458.1 GMP synthase -
  ACF8MK_RS15815 (ACF8MK_15815) - 3626113..3627288 (-) 1176 WP_392537459.1 iron-containing alcohol dehydrogenase -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 37761.36 Da        Isoelectric Point: 5.0627

>NTDB_id=1060352 ACF8MK_RS15790 WP_028381962.1 3622259..3623305(-) (recA) [Legionella sp. 227]
MEENKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVI
AECQKMGGTAAFIDAEHALDPSYAQKLGVNVDELLVSQPDTGEQALEITDMLVRSAAVDVIIVDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGEEILGS
ETRVKVVKNKVAPPFKMTEFDILYNEGISRESEIINLGVQLNLIEKSGAWYSYKGEKIGQGKDNVRLYLKDNPQVAATLE
QQIRTELLEKKLPMLASASAEEFEAVDD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=1060352 ACF8MK_RS15790 WP_028381962.1 3622259..3623305(-) (recA) [Legionella sp. 227]
ATGGAAGAAAATAAACAAAAAGCATTATCAGCCGCCCTCTCGCAAATTGAACGTCAATTCGGTAAAGGCTCAGTGATGCG
TATGGGCGACAGCACCGTATCTCGAGATATCGAAGCCATTTCAACAGGGTCTTTAGGATTAGACATTGCATTGGGAATTG
GTGGATTACCTAAAGGACGTATTGTTGAAATTTATGGACCAGAGTCCTCTGGTAAAACAACACTCACATTGCAAGTTATT
GCCGAGTGTCAAAAAATGGGTGGAACAGCCGCATTTATTGATGCAGAACATGCTTTAGATCCAAGCTATGCGCAAAAACT
GGGTGTTAATGTGGATGAGTTACTGGTTTCTCAGCCAGATACCGGGGAACAAGCACTGGAAATTACCGATATGTTGGTAC
GCTCAGCCGCAGTGGATGTAATTATTGTCGACTCTGTTGCTGCGTTGACTCCCAAAGCGGAAATTGAAGGAGAAATGGGG
GATTCTCATGTTGGTTTACAAGCTCGACTCATGTCACAAGCTTTACGTAAATTGACTGCCAATATTAAACGCTCCAATAC
CCTAGTTATTTTTATTAACCAGATTCGTATGAAAATTGGTGTCATGTTTGGCAGCCCTGAAACAACTACGGGTGGTAATG
CACTGAAATTCTATGCTTCTGTTCGCTTAGATATTCGCCGTATCGGGTCAATTAAGAAAGGTGAGGAAATCTTAGGTAGT
GAAACACGAGTTAAAGTAGTGAAGAATAAAGTGGCACCACCATTCAAGATGACGGAATTTGATATTCTCTACAATGAAGG
AATTTCCCGTGAAAGTGAAATTATCAATTTGGGTGTTCAACTCAATCTAATTGAAAAATCTGGAGCTTGGTACAGCTATA
AAGGAGAGAAGATTGGCCAAGGCAAAGATAATGTGCGTTTATACTTGAAAGATAACCCTCAAGTTGCAGCTACTCTTGAG
CAGCAAATTCGTACTGAGCTTTTAGAGAAAAAGCTGCCTATGCTTGCGTCAGCCAGTGCGGAAGAGTTTGAGGCTGTTGA
TGACTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-269)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0W0S741

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Pseudomonas stutzeri DSM 10701

75.793

99.713

0.756
  recA Acinetobacter baylyi ADP1

72.965

98.851

0.721
  recA Vibrio cholerae strain A1552

70.977

100

0.71
  recA Vibrio cholerae O1 biovar El Tor strain E7946

70.977

100

0.71
  recA Acinetobacter baumannii D1279779

75

94.253

0.707
  recA Glaesserella parasuis strain SC1401

70.725

99.138

0.701
  recA Ralstonia pseudosolanacearum GMI1000

72.644

94.54

0.687
  recA Neisseria gonorrhoeae MS11

72.84

93.103

0.678
  recA Neisseria gonorrhoeae MS11

72.84

93.103

0.678
  recA Neisseria gonorrhoeae strain FA1090

72.84

93.103

0.678
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

65.465

95.69

0.626
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.939

94.253

0.612
  recA Helicobacter pylori 26695

64.308

93.391

0.601
  recA Helicobacter pylori strain NCTC11637

64.308

93.391

0.601
  recA Bacillus subtilis subsp. subtilis str. 168

65.109

92.241

0.601
  recA Streptococcus pyogenes NZ131

57.714

100

0.58
  recA Latilactobacillus sakei subsp. sakei 23K

59.644

96.839

0.578
  recA Streptococcus mitis SK321

60.856

93.966

0.572
  recA Streptococcus mitis NCTC 12261

60.245

93.966

0.566
  recA Streptococcus mutans UA159

60.061

94.253

0.566
  recA Streptococcus pneumoniae Rx1

59.939

93.966

0.563
  recA Streptococcus pneumoniae D39

59.939

93.966

0.563
  recA Streptococcus pneumoniae R6

59.939

93.966

0.563
  recA Streptococcus pneumoniae TIGR4

59.939

93.966

0.563
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

59.021

93.966

0.555
  recA Lactococcus lactis subsp. cremoris KW2

58.951

93.103

0.549

Multiple sequence alignment