Detailed information NTG1057982

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACFJIY_RS24395
• Genome accession: NZ_CP170555
• Coordinates: 4965404..4966456 (+)
• Length: 350 a.a.
• NCBI ID: WP_038679506.1
• Uniprot ID: -
• Organism: Pimelobacter simplex strain UC22_34
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4960404..4971456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJIY_RS24365 (ACFJIY_24365)	-	4961093..4961656 (+)	564	WP_377322608.1	DM13 domain-containing protein	-
ACFJIY_RS24370 (ACFJIY_24370)	-	4961661..4962623 (+)	963	WP_038679515.1	DUF389 domain-containing protein	-
ACFJIY_RS24375 (ACFJIY_24375)	-	4962646..4963173 (+)	528	WP_377322610.1	hypothetical protein	-
ACFJIY_RS24380 (ACFJIY_24380)	-	4963223..4963768 (+)	546	WP_377322612.1	DinB family protein	-
ACFJIY_RS24385 (ACFJIY_24385)	-	4963765..4963959 (+)	195	WP_038679509.1	DUF3046 domain-containing protein	-
ACFJIY_RS24390 (ACFJIY_24390)	-	4963956..4965212 (+)	1257	WP_377322614.1	MFS transporter	-
ACFJIY_RS24395 (ACFJIY_24395)	recA	4965404..4966456 (+)	1053	WP_038679506.1	recombinase RecA	Machinery gene
ACFJIY_RS24400 (ACFJIY_24400)	-	4967242..4967817 (+)	576	WP_377322616.1	regulatory protein RecX	-
ACFJIY_RS24405 (ACFJIY_24405)	-	4967804..4968328 (+)	525	WP_052138729.1	phosphoribosyltransferase	-
ACFJIY_RS24410 (ACFJIY_24410)	-	4968338..4969204 (+)	867	WP_052138728.1	PPK2 family polyphosphate kinase	-
ACFJIY_RS24415 (ACFJIY_24415)	-	4969207..4969983 (+)	777	WP_377322619.1	HipA family kinase	-
ACFJIY_RS24420 (ACFJIY_24420)	-	4969980..4970399 (+)	420	WP_038679501.1	DUF3037 domain-containing protein	-
ACFJIY_RS24425 (ACFJIY_24425)	-	4970481..4971224 (-)	744	WP_038679499.1	sirohydrochlorin chelatase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37260.38 Da
• Isoelectric Point: 4.7256

>NTDB_id=1057982 ACFJIY_RS24395 WP_038679506.1 4965404..4966456(+) (recA) [Pimelobacter simplex strain UC22_34]
MAGDDRQKALDAALLNIEKSYGKGSVMRLGDDSRAPLDVIPTGSISLDVALGIGGLPRGRVVEIYGPESSGKTTVALHSV
ASAQAAGGIVAFIDAEHALDPDYAKALGVDTDALLVSQPDSGEQALEIADMLIRSGALDLIVIDSVAALVPRAEIEGEMG
DSHVGLQARLMSQALRKMTGALNQSKTTAIFINQLREKIGVMFGSPETTTGGRALKFYSSVRLDVRRIETLKDGTDMVGN
RTRVKVVKNKVAPPFKQAEFDIMYGKGISREGGLIDVGVEAGLIRKAGAWYTYEGDQLGQGKENARTFLKDNPDLANELE
KKILEKLGVTPTVEGDFTDLSDEPIGVDSF

Nucleotide

• Length: 1053 bp

>NTDB_id=1057982 ACFJIY_RS24395 WP_038679506.1 4965404..4966456(+) (recA) [Pimelobacter simplex strain UC22_34]
ATGGCTGGAGACGACCGCCAGAAGGCCCTCGACGCTGCGCTTCTCAACATCGAGAAGTCGTACGGCAAGGGATCCGTGAT
GCGACTCGGTGACGACTCGCGCGCCCCCCTCGACGTGATTCCGACCGGATCCATCTCCCTCGACGTCGCTCTCGGCATCG
GTGGTCTCCCGCGCGGACGGGTCGTGGAGATCTACGGCCCCGAGTCGAGCGGTAAGACCACCGTCGCGCTCCACTCGGTG
GCCAGCGCCCAGGCCGCCGGCGGCATCGTCGCCTTCATCGACGCCGAGCACGCCCTCGACCCCGACTACGCCAAGGCACT
CGGCGTCGACACCGACGCCCTCCTGGTCTCCCAGCCCGACTCCGGTGAGCAGGCCCTCGAGATCGCCGACATGCTCATCC
GCTCCGGTGCCCTCGACCTCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCCGCGCCGAGATCGAGGGCGAGATGGGC
GACAGCCACGTCGGCCTCCAGGCCCGCCTGATGAGCCAGGCCCTCCGCAAGATGACCGGTGCCCTCAACCAGTCCAAGAC
CACCGCCATCTTCATCAACCAGCTGCGCGAGAAGATCGGCGTCATGTTCGGCTCGCCCGAGACCACCACCGGTGGCCGCG
CGCTGAAGTTCTACTCCTCCGTCCGCCTCGACGTCCGCCGCATCGAGACCCTCAAGGACGGCACCGACATGGTCGGCAAC
CGGACCCGGGTCAAGGTCGTCAAGAACAAGGTCGCCCCGCCCTTCAAGCAGGCCGAGTTCGACATCATGTACGGCAAGGG
CATCTCCCGCGAGGGTGGCCTCATCGACGTCGGCGTCGAGGCAGGCCTCATCCGCAAGGCCGGCGCCTGGTACACCTACG
AGGGCGACCAGCTCGGCCAGGGCAAGGAGAACGCCCGCACCTTCCTCAAGGACAACCCGGACCTGGCCAACGAGCTGGAG
AAGAAGATCCTCGAGAAGCTCGGCGTCACCCCCACCGTCGAGGGCGACTTCACCGACCTCTCCGACGAGCCGATCGGCGT
CGACTCGTTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (8-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	63.689	99.143	0.631
recA	Bacillus subtilis subsp. subtilis str. 168	66.769	92.857	0.62
recA	Streptococcus mutans UA159	63.45	97.714	0.62
recA	Pseudomonas stutzeri DSM 10701	66.055	93.429	0.617
recA	Ralstonia pseudosolanacearum GMI1000	67.937	90	0.611
recA	Vibrio cholerae strain A1552	65.741	92.571	0.609
recA	Vibrio cholerae O1 biovar El Tor strain E7946	65.741	92.571	0.609
recA	Streptococcus pneumoniae D39	60.745	99.714	0.606
recA	Streptococcus pneumoniae Rx1	60.745	99.714	0.606
recA	Streptococcus pneumoniae R6	60.745	99.714	0.606
recA	Streptococcus pneumoniae TIGR4	60.745	99.714	0.606
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	62.17	97.429	0.606
recA	Streptococcus pyogenes NZ131	64.242	94.286	0.606
recA	Acinetobacter baumannii D1279779	64.134	94	0.603
recA	Acinetobacter baylyi ADP1	65.123	92.571	0.603
recA	Neisseria gonorrhoeae MS11	65.421	91.714	0.6
recA	Neisseria gonorrhoeae MS11	65.421	91.714	0.6
recA	Neisseria gonorrhoeae strain FA1090	65.421	91.714	0.6
recA	Streptococcus mitis NCTC 12261	62.538	94.571	0.591
recA	Streptococcus mitis SK321	62.538	94.571	0.591
recA	Helicobacter pylori 26695	60.35	98	0.591
recA	Helicobacter pylori strain NCTC11637	60.35	98	0.591
recA	Lactococcus lactis subsp. cremoris KW2	63.077	92.857	0.586
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.121	94.286	0.586
recA	Glaesserella parasuis strain SC1401	59.357	97.714	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.125	91.714	0.551