Detailed information NTG1052845

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABUS12_RS08325
• Genome accession: NZ_CP169776
• Coordinates: 1736879..1737928 (+)
• Length: 349 a.a.
• NCBI ID: WP_000344169.1
• Uniprot ID: N9L2B2
• Organism: Acinetobacter baumannii strain Hv455
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1722363..1737928	1736879..1737928	within	0

Gene organization within MGE regions

Location: 1722363..1737928

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS12_RS08250	-	1723634..1724224 (+)	591	Protein_1626	SOS response-associated peptidase family protein	-
ABUS12_RS08255	-	1724462..1725917 (+)	1456	Protein_1627	SulP family inorganic anion transporter	-
ABUS12_RS08260	-	1725965..1727143 (-)	1179	WP_001026396.1	S8 family peptidase	-
ABUS12_RS08265	-	1727375..1727488 (-)	114	WP_085916944.1	hypothetical protein	-
ABUS12_RS08270	-	1728341..1729561 (+)	1221	Protein_1630	IS3-like element ISAba34 family transposase	-
ABUS12_RS08275	-	1729671..1730417 (-)	747	WP_001233770.1	alpha/beta hydrolase	-
ABUS12_RS08280	-	1730425..1731831 (-)	1407	WP_000093791.1	amino acid permease	-
ABUS12_RS08285	kynU	1731872..1733122 (-)	1251	WP_000632783.1	kynureninase	-
ABUS12_RS08290	gigD	1733269..1733718 (+)	450	WP_001099948.1	Lrp/AsnC family transcriptional regulator GigD	-
ABUS12_RS08295	-	1733764..1734300 (+)	537	WP_000573221.1	GNAT family N-acetyltransferase	-
ABUS12_RS08300	-	1734349..1734642 (-)	294	WP_000689662.1	hypothetical protein	-
ABUS12_RS08305	-	1734757..1734993 (-)	237	WP_000525044.1	hypothetical protein	-
ABUS12_RS08310	-	1735092..1735451 (-)	360	WP_000798367.1	YcgJ family protein	-
ABUS12_RS08315	-	1735623..1736309 (+)	687	WP_025464668.1	HAD-IA family hydrolase	-
ABUS12_RS08320	-	1736293..1736733 (+)	441	WP_000040963.1	RNA-binding S4 domain-containing protein	-
ABUS12_RS08325	recA	1736879..1737928 (+)	1050	WP_000344169.1	recombinase RecA	Machinery gene

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37891.25 Da
• Isoelectric Point: 4.7769

>NTDB_id=1052845 ABUS12_RS08325 WP_000344169.1 1736879..1737928(+) (recA) [Acinetobacter baumannii strain Hv455]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIER
NIREQLLTTGTNGAVQIEDEEEPDLLLES

Nucleotide

• Length: 1050 bp

>NTDB_id=1052845 ABUS12_RS08325 WP_000344169.1 1736879..1737928(+) (recA) [Acinetobacter baumannii strain Hv455]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAGCAATTTGGTAAAAATACGGTTATGCG
TCTTGGTGATAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATCGAAATTTATGGTCCTGAATCTTCTGGTAAAACTACAATGACATTGCAAGCAATTGCT
CAATGTCAAAAATCTGGTGGTACATGTGCTTTCATTGATGCTGAGCACGCCCTAGACCCTCAATATGCACGCAAACTTGG
TGTAGATATTGATAACCTACTTGTTTCACAACCCGACAATGGTGAGCAAGCACTTGAAATTGCTGACATGCTTGTCCGTT
CAGGCGCAATTGATTTAATCGTTGTGGACTCGGTAGCTGCACTTACCCCTAAAGCAGAAATCGAAGGTGAGATGGGTGAC
TCTCATATGGGTCTACAAGCACGTCTTATGAGCCAGGCACTTCGTAAAATTACGGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACTACCACTGGTGGTAACGCTC
TTAAATTCTACGCTTCAGTTCGTTTAGATATTCGTCGTATCGGTCAAGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAACAAAATGGCTCCTCCGTTTAAAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAACTAGGTGAACTTGTAGATTTAGCTGTACAACAGGATATCGTACAAAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAAAACAATGTAATTCGCTATTTTGAAGAAAATACTCAAATAGCTGAAGAAATTGAACGT
AATATCCGTGAACAATTGCTGACTACAGGCACAAATGGTGCAGTTCAAATTGAAGATGAAGAAGAGCCAGATCTTTTATT
AGAATCGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: N9L2B2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baumannii D1279779	99.713	100	0.997
recA	Acinetobacter baylyi ADP1	93.084	99.427	0.926
recA	Pseudomonas stutzeri DSM 10701	75.602	95.129	0.719
recA	Vibrio cholerae strain A1552	73.7	93.696	0.691
recA	Vibrio cholerae O1 biovar El Tor strain E7946	73.7	93.696	0.691
recA	Ralstonia pseudosolanacearum GMI1000	70.517	94.269	0.665
recA	Glaesserella parasuis strain SC1401	71.605	92.837	0.665
recA	Neisseria gonorrhoeae MS11	65.517	99.713	0.653
recA	Neisseria gonorrhoeae MS11	65.517	99.713	0.653
recA	Neisseria gonorrhoeae strain FA1090	65.517	99.713	0.653
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.808	98.281	0.607
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.746	94.842	0.605
recA	Helicobacter pylori strain NCTC11637	64.22	93.696	0.602
recA	Helicobacter pylori 26695	63.914	93.696	0.599
recA	Streptococcus pyogenes NZ131	58.924	100	0.596
recA	Streptococcus mitis SK321	60.411	97.708	0.59
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.883	93.41	0.587
recA	Streptococcus pneumoniae D39	61.963	93.41	0.579
recA	Streptococcus mitis NCTC 12261	61.963	93.41	0.579
recA	Streptococcus pneumoniae Rx1	61.963	93.41	0.579
recA	Streptococcus pneumoniae R6	61.963	93.41	0.579
recA	Streptococcus pneumoniae TIGR4	61.963	93.41	0.579
recA	Streptococcus mutans UA159	61.585	93.983	0.579
recA	Bacillus subtilis subsp. subtilis str. 168	62.422	92.264	0.576
recA	Lactococcus lactis subsp. cremoris KW2	58.824	92.55	0.544
recA	Latilactobacillus sakei subsp. sakei 23K	58.567	91.977	0.539