Detailed information NTG0105240

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8665_RS00055
• Genome accession: NZ_AP028386
• Coordinates: 14798..15037 (-)
• Length: 79 a.a.
• NCBI ID: WP_317677003.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-11348
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 9798..20037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8665_RS00045 (B11348_00080)	gltD	12743..14188 (+)	1446	WP_052791272.1	glutamate synthase subunit beta	-
R8665_RS00050 (B11348_00090)	rnhB	14189..14764 (-)	576	WP_317643770.1	ribonuclease HII	-
R8665_RS00055 (B11348_00100)	Cj0011c	14798..15037 (-)	240	WP_317677003.1	ComEA family DNA-binding protein	Machinery gene
R8665_RS00060 (B11348_00110)	rrc	15102..15749 (-)	648	WP_002855562.1	ferritin family protein	-
R8665_RS00065 (B11348_00120)	ilvD	15908..17584 (+)	1677	WP_317643773.1	dihydroxy-acid dehydratase	-
R8665_RS00070 (B11348_00130)	-	17596..18120 (-)	525	WP_002860860.1	YagU family protein	-
R8665_RS00075 (B11348_00140)	-	18212..19438 (-)	1227	WP_254414601.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8898.53 Da
• Isoelectric Point: 10.1677

>NTDB_id=105240 R8665_RS00055 WP_317677003.1 14798..15037(-) (Cj0011c) [Campylobacter jejuni strain BCH-11348]
MKKLLFLFFTLTAFLFGTVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE

Nucleotide

• Length: 240 bp

>NTDB_id=105240 R8665_RS00055 WP_317677003.1 14798..15037(-) (Cj0011c) [Campylobacter jejuni strain BCH-11348]
ATGAAAAAATTACTATTTTTATTTTTTACTTTAACGGCTTTTCTCTTTGGTACTGTAAATATCAACACTGCAACACTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAAGCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAGTAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	96.203	100	0.962
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comEA	Bacillus subtilis subsp. subtilis str. 168	59.016	77.215	0.456
comEA	Acinetobacter baylyi ADP1	55.738	77.215	0.43
comEA	Staphylococcus aureus MW2	55.738	77.215	0.43
comEA	Staphylococcus aureus N315	55.738	77.215	0.43
comEA	Vibrio cholerae strain A1552	63.462	65.823	0.418
comEA	Vibrio cholerae C6706	63.462	65.823	0.418
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae D39	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae R6	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus mitis NCTC 12261	50.794	79.747	0.405
comEA	Lactococcus lactis subsp. cremoris KW2	51.613	78.481	0.405
comEA/celA/cilE	Streptococcus mitis SK321	49.206	79.747	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	47.619	79.747	0.38
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comEA	Vibrio campbellii strain DS40M4	49.18	77.215	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio parahaemolyticus RIMD 2210633	47.541	77.215	0.367