Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   ACE2AN_RS08940 Genome accession   NZ_CP169564
Coordinates   1764650..1765816 (-) Length   388 a.a.
NCBI ID   WP_050102587.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 6_2F1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1759650..1770816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACE2AN_RS08910 - 1759958..1760383 (-) 426 WP_000204067.1 hypothetical protein -
  ACE2AN_RS08915 - 1760527..1760871 (-) 345 WP_050212486.1 ImmA/IrrE family metallo-endopeptidase -
  ACE2AN_RS08920 - 1760917..1761123 (-) 207 WP_000366086.1 hypothetical protein -
  ACE2AN_RS08925 - 1761110..1761295 (-) 186 WP_081528364.1 helix-turn-helix transcriptional regulator -
  ACE2AN_RS08930 lytA 1761641..1762597 (-) 957 WP_000405234.1 N-acetylmuramoyl-L-alanine amidase LytA -
  ACE2AN_RS08935 - 1762973..1764343 (-) 1371 WP_001036270.1 MATE family efflux transporter -
  ACE2AN_RS08940 recA 1764650..1765816 (-) 1167 WP_050102587.1 recombinase RecA Machinery gene
  ACE2AN_RS08945 cinA 1765871..1767127 (-) 1257 WP_000642723.1 competence/damage-inducible protein A Machinery gene
  ACE2AN_RS08950 - 1767211..1768227 (-) 1017 WP_000239278.1 LCP family protein -
  ACE2AN_RS08955 - 1768235..1768753 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  ACE2AN_RS08960 tsaE 1768743..1769186 (-) 444 WP_081528363.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACE2AN_RS08965 comM 1769272..1769892 (-) 621 WP_000839910.1 hypothetical protein Regulator

Sequence

Protein


Download         Length: 388 a.a.        Molecular weight: 41935.73 Da        Isoelectric Point: 4.8403

>NTDB_id=1052204 ACE2AN_RS08940 WP_050102587.1 1764650..1765816(-) (recA) [Streptococcus pneumoniae strain 6_2F1]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIIYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVTLDLGDELEIEIEE

Nucleotide


Download         Length: 1167 bp        

>NTDB_id=1052204 ACE2AN_RS08940 WP_050102587.1 1764650..1765816(-) (recA) [Streptococcus pneumoniae strain 6_2F1]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGACCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATATACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCGGAGCATCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTACGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus pneumoniae Rx1

99.485

100

0.995
  recA Streptococcus pneumoniae D39

99.485

100

0.995
  recA Streptococcus pneumoniae R6

99.485

100

0.995
  recA Streptococcus pneumoniae TIGR4

99.485

100

0.995
  recA Streptococcus mitis NCTC 12261

94.072

100

0.941
  recA Streptococcus mitis SK321

93.557

100

0.936
  recA Streptococcus mutans UA159

83.463

99.742

0.832
  recA Streptococcus pyogenes NZ131

90.435

88.918

0.804
  recA Lactococcus lactis subsp. cremoris KW2

78.125

90.722

0.709
  recA Latilactobacillus sakei subsp. sakei 23K

67.63

89.175

0.603
  recA Bacillus subtilis subsp. subtilis str. 168

68.485

85.052

0.582
  recA Glaesserella parasuis strain SC1401

57.373

96.134

0.552
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

64.706

83.247

0.539
  recA Neisseria gonorrhoeae MS11

60.177

87.371

0.526
  recA Neisseria gonorrhoeae strain FA1090

60.177

87.371

0.526
  recA Neisseria gonorrhoeae MS11

60.177

87.371

0.526
  recA Vibrio cholerae strain A1552

62.539

83.247

0.521
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.539

83.247

0.521
  recA Acinetobacter baumannii D1279779

61.963

84.021

0.521
  recA Acinetobacter baylyi ADP1

61.35

84.021

0.515
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

60.423

85.309

0.515
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.529

87.629

0.513
  recA Helicobacter pylori strain NCTC11637

55.84

90.464

0.505
  recA Helicobacter pylori 26695

55.84

90.464

0.505
  recA Pseudomonas stutzeri DSM 10701

59.509

84.021

0.5
  recA Ralstonia pseudosolanacearum GMI1000

59.937

81.701

0.49

Multiple sequence alignment