Detailed information NTG1042987

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABQY64_RS08925
• Genome accession: NZ_CP168194
• Coordinates: 2049206..2050240 (+)
• Length: 344 a.a.
• NCBI ID: WP_016904265.1
• Uniprot ID: A0A2N7V3Y4
• Organism: Xanthomonas sp. WHRI 7065
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2044206..2055240

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABQY64_RS08915 (ABQY64_008915)	ubiB	2046617..2048293 (+)	1677	WP_104644578.1	2-polyprenylphenol 6-hydroxylase	-
ABQY64_RS08920 (ABQY64_008920)	lexA	2048386..2049033 (+)	648	WP_212579423.1	transcriptional repressor LexA	-
ABQY64_RS08925 (ABQY64_008925)	recA	2049206..2050240 (+)	1035	WP_016904265.1	recombinase RecA	Machinery gene
ABQY64_RS08930 (ABQY64_008930)	recX	2050516..2051004 (+)	489	WP_016904266.1	recombination regulator RecX	-
ABQY64_RS08935 (ABQY64_008935)	alaS	2051106..2053754 (+)	2649	WP_349780009.1	alanine--tRNA ligase	-
ABQY64_RS08940 (ABQY64_008940)	csrA	2053893..2054105 (+)	213	WP_024939585.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37162.75 Da
• Isoelectric Point: 5.3743

>NTDB_id=1042987 ABQY64_RS08925 WP_016904265.1 2049206..2050240(+) (recA) [Xanthomonas sp. WHRI 7065]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKKGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRHKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGEERIGQGKDNARGYLRDNPQVAVRL
EAELREKFQPAEAPREAGDDVEKE

Nucleotide

• Length: 1035 bp

>NTDB_id=1042987 ABQY64_RS08925 WP_016904265.1 2049206..2050240(+) (recA) [Xanthomonas sp. WHRI 7065]
ATGGATGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAGAAGCAATTCGGCAAGGGCTCGGTGATGCG
CATGGGCGACCGTGTGATCGAGGCCGTCGAAGTGATTCCGACCGGCTCGCTGATGTTGGACATCGCACTGGGGATCGGCG
GCCTGCCCAAGGGCCGCGTGGTGGAGATCTACGGTCCGGAATCGTCGGGCAAGACCACCCTGACCCTGCAGGCGATTGCC
GAGTGCCAGAAGAAGGGTGGCACCGCTGCCTTCATCGACGCCGAGCATGCGCTGGACCCGATCTACGCCGCCAAGCTGGG
CGTCAATGTCGACGACCTGCTGCTGTCGCAGCCGGATACCGGCGAACAGGCGCTGGAAATCGCCGACATGCTGGTGCGTT
CCGGTTCGGTGGACATCGTGGTGGTCGACTCGGTCGCCGCGCTGACCCCGAAGGCGGAAATCGAAGGTGAAATGGGTGAC
CAGCTGCCGGGTCTGCAGGCTCGCCTGATGAGCCAGGCGCTGCGCAAGCTGACCGGCAACATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAACCAGTTGCGCCACAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCACTGGCGGCA
ACGCGCTGAAGTTCTACGCATCGGTCCGTCTGGATATCCGTCGTATCGGCGCGATCAAGAAGGGCGACGAAATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTCTACGGCGA
AGGCATCAGCCGCGAGGGTGAGCTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGAGAAGGCCGGCGCCTGGTACAGCT
ACGGCGAAGAACGCATCGGGCAGGGCAAGGACAACGCGCGTGGCTATCTGCGCGACAACCCGCAGGTTGCGGTGCGGCTG
GAAGCCGAGCTGCGCGAGAAGTTCCAGCCGGCCGAAGCGCCGCGCGAAGCCGGCGACGATGTCGAGAAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A2N7V3Y4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	69.767	100	0.698
recA	Pseudomonas stutzeri DSM 10701	70.623	97.965	0.692
recA	Vibrio cholerae strain A1552	68.103	100	0.689
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.103	100	0.689
recA	Ralstonia pseudosolanacearum GMI1000	75.399	90.988	0.686
recA	Acinetobacter baumannii D1279779	71.646	95.349	0.683
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae strain FA1090	68.405	94.767	0.648
recA	Glaesserella parasuis strain SC1401	68.111	93.895	0.64
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Latilactobacillus sakei subsp. sakei 23K	62.275	97.093	0.605
recA	Bacillus subtilis subsp. subtilis str. 168	63.077	94.477	0.596
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.353	92.151	0.593
recA	Helicobacter pylori strain NCTC11637	60.843	96.512	0.587
recA	Helicobacter pylori 26695	60.542	96.512	0.584
recA	Streptococcus pneumoniae Rx1	60.976	95.349	0.581
recA	Streptococcus mitis SK321	60.976	95.349	0.581
recA	Streptococcus pneumoniae D39	60.976	95.349	0.581
recA	Streptococcus pneumoniae R6	60.976	95.349	0.581
recA	Streptococcus pneumoniae TIGR4	60.976	95.349	0.581
recA	Streptococcus pyogenes NZ131	60.606	95.93	0.581
recA	Streptococcus mitis NCTC 12261	60.671	95.349	0.578
recA	Streptococcus mutans UA159	60.303	95.93	0.578
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.182	95.93	0.558
recA	Lactococcus lactis subsp. cremoris KW2	59.077	94.477	0.558