Detailed information NTG1039965

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ACCQ12_RS08615
• Genome accession: NZ_CP167863
• Coordinates: 1992572..1993606 (+)
• Length: 344 a.a.
• NCBI ID: WP_039404226.1
• Uniprot ID: A0AB34PC04
• Organism: Xanthomonas sp. NCPPB 1068
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1987572..1998606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCQ12_RS08605 (ACCQ12_08605)	ubiB	1990003..1991679 (+)	1677	WP_372383386.1	2-polyprenylphenol 6-hydroxylase	-
ACCQ12_RS08610 (ACCQ12_08610)	lexA	1991758..1992399 (+)	642	WP_039404224.1	transcriptional repressor LexA	-
ACCQ12_RS08615 (ACCQ12_08615)	recA	1992572..1993606 (+)	1035	WP_039404226.1	recombinase RecA	Machinery gene
ACCQ12_RS08620 (ACCQ12_08620)	recX	1993857..1994345 (+)	489	WP_039563830.1	recombination regulator RecX	-
ACCQ12_RS08625 (ACCQ12_08625)	alaS	1994447..1997095 (+)	2649	WP_372383387.1	alanine--tRNA ligase	-
ACCQ12_RS08630 (ACCQ12_08630)	csrA	1997235..1997447 (+)	213	WP_003481884.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37072.68 Da
• Isoelectric Point: 5.2050

>NTDB_id=1039965 ACCQ12_RS08615 WP_039404226.1 1992572..1993606(+) (recA) [Xanthomonas sp. NCPPB 1068]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEIIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKKGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQIVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARGYLRDNPQVAAKL
EAELREKFQPAEAPREAGDDAEKE

Nucleotide

• Length: 1035 bp

>NTDB_id=1039965 ACCQ12_RS08615 WP_039404226.1 1992572..1993606(+) (recA) [Xanthomonas sp. NCPPB 1068]
ATGGATGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCCGTGATGCG
TATGGGCGACCGCGTGATCGAGGCGGTCGAGATCATTCCGACCGGTTCGCTGATGTTGGACATCGCACTGGGGATCGGCG
GCCTGCCGAAAGGCCGCGTCGTGGAAATCTACGGCCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGCCATTGCC
GAGTGCCAGAAGAAGGGCGGGACGGCTGCCTTCATCGATGCCGAGCATGCGCTGGATCCGATCTATGCCGCCAAGCTGGG
CGTCAACGTCGACGACCTGCTGCTGTCGCAGCCCGATACCGGTGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGCT
CGGGCTCGGTGGACATCGTGGTGGTCGACTCGGTGGCCGCACTGACCCCGAAGGCGGAAATCGAAGGCGAAATGGGCGAC
CAGTTGCCGGGCCTGCAGGCGCGCCTGATGAGCCAGGCCCTGCGCAAGCTGACCGGCAACATCAAGCGATCCAACACGCT
GGTGGTCTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGTA
ACGCATTGAAGTTCTACGCCTCCGTGCGCCTGGACATCCGTCGCATTGGCGCGATCAAGAAGGGTGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCACCTCCGTTCAAGCAGATCGTGACCGAAATCCTCTACGGCGA
AGGCATCAGCCGCGAAGGCGAACTGATCGACATGGGTGTGGAAGCCAAGCTGGTGGACAAGGCCGGCGCCTGGTACAGCT
ACGGCGACGAGCGTATCGGTCAGGGCAAGGACAATGCGCGTGGCTACCTGCGCGACAACCCGCAGGTCGCTGCCAAGCTC
GAAGCAGAGCTGCGCGAGAAGTTCCAGCCCGCCGAAGCGCCCCGCGAAGCAGGCGACGACGCCGAGAAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	70.058	100	0.701
recA	Pseudomonas stutzeri DSM 10701	70.175	99.419	0.698
recA	Acinetobacter baumannii D1279779	71.951	95.349	0.686
recA	Ralstonia pseudosolanacearum GMI1000	75.08	90.988	0.683
recA	Vibrio cholerae strain A1552	70.859	94.767	0.672
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	94.767	0.672
recA	Glaesserella parasuis strain SC1401	65.116	100	0.651
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae MS11	68.405	94.767	0.648
recA	Neisseria gonorrhoeae strain FA1090	68.405	94.767	0.648
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.174	97.093	0.613
recA	Latilactobacillus sakei subsp. sakei 23K	62.275	97.093	0.605
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.688	93.023	0.602
recA	Helicobacter pylori strain NCTC11637	61.747	96.512	0.596
recA	Helicobacter pylori 26695	61.446	96.512	0.593
recA	Bacillus subtilis subsp. subtilis str. 168	62.769	94.477	0.593
recA	Streptococcus mitis SK321	61.28	95.349	0.584
recA	Streptococcus pneumoniae D39	60.976	95.349	0.581
recA	Streptococcus pneumoniae R6	60.976	95.349	0.581
recA	Streptococcus pneumoniae Rx1	60.976	95.349	0.581
recA	Streptococcus pneumoniae TIGR4	60.976	95.349	0.581
recA	Streptococcus mitis NCTC 12261	60.671	95.349	0.578
recA	Streptococcus pyogenes NZ131	60.303	95.93	0.578
recA	Streptococcus mutans UA159	60	95.93	0.576
recA	Lactococcus lactis subsp. cremoris KW2	59.077	94.477	0.558
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.879	95.93	0.555