Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   AB6M97_RS10650 Genome accession   NZ_CP163514
Coordinates   2144753..2145907 (-) Length   384 a.a.
NCBI ID   WP_121836246.1    Uniprot ID   A0A3L9DKE9
Organism   Streptococcus hillyeri strain S23-3001-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2139753..2150907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M97_RS10625 (AB6M97_10625) - 2140927..2142531 (-) 1605 WP_369350764.1 DUF2079 domain-containing protein -
  AB6M97_RS10630 (AB6M97_10630) - 2142795..2143106 (-) 312 WP_121836243.1 DUF1292 domain-containing protein -
  AB6M97_RS10635 (AB6M97_10635) ruvX 2143179..2143598 (-) 420 WP_121836244.1 Holliday junction resolvase RuvX -
  AB6M97_RS10640 (AB6M97_10640) - 2143595..2143864 (-) 270 WP_027974214.1 IreB family regulatory phosphoprotein -
  AB6M97_RS10645 (AB6M97_10645) spx 2144141..2144539 (-) 399 WP_121836245.1 transcriptional regulator Spx -
  AB6M97_RS10650 (AB6M97_10650) recA 2144753..2145907 (-) 1155 WP_121836246.1 recombinase RecA Machinery gene
  AB6M97_RS10655 (AB6M97_10655) cinA 2145939..2147210 (-) 1272 WP_121836247.1 competence/damage-inducible protein A Machinery gene
  AB6M97_RS10660 (AB6M97_10660) - 2147335..2147583 (-) 249 Protein_2046 hypothetical protein -
  AB6M97_RS10665 (AB6M97_10665) - 2148118..2148972 (+) 855 WP_369350768.1 helix-turn-helix domain-containing protein -
  AB6M97_RS10670 (AB6M97_10670) - 2149154..2149501 (-) 348 WP_369350769.1 hypothetical protein -
  AB6M97_RS10675 (AB6M97_10675) - 2149513..2150160 (-) 648 WP_183121691.1 hypothetical protein -

Sequence

Protein


Download         Length: 384 a.a.        Molecular weight: 41364.12 Da        Isoelectric Point: 4.7722

>NTDB_id=1030383 AB6M97_RS10650 WP_121836246.1 2144753..2145907(-) (recA) [Streptococcus hillyeri strain S23-3001-1]
MAKKTKKTEEITKKFGDERQKALEEALKGIEKDFGKGAVMKLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
STQIKGTGDQKDQSIGKETKIKVVKNKVAPPFQVAEVEIMYGEGISQTGELLKIATELDIIKKAGAWFSYNDEKIGQGSE
KAKEYLKEHPEVFEEIDRKVRLHYGLLEESDEEKAAKATPVVEEVTSAPEIDTEDIAIELELDD

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1030383 AB6M97_RS10650 WP_121836246.1 2144753..2145907(-) (recA) [Streptococcus hillyeri strain S23-3001-1]
TTGGCTAAGAAAACCAAAAAGACAGAAGAAATTACCAAAAAATTTGGTGACGAGCGTCAGAAAGCTTTGGAAGAAGCCTT
AAAAGGCATTGAAAAAGACTTTGGTAAAGGCGCTGTGATGAAATTGGGTGAACGTGCGGAGCAGAAAGTTCAAGTGATGA
GCTCAGGTTCATTGGCGCTAGACATCGCTCTTGGTGCGGGTGGCTACCCTAAAGGACGTATTATTGAAATCTACGGTCCT
GAAAGTTCAGGTAAAACAACAGTTGCCCTTCATGCGGTTGCTCAAGCACAAAAAGAGGGTGGTATTGCTGCCTTTATCGA
CGCGGAACATGCCCTTGATCCAGCCTATGCAGCAGCTCTTGGGGTTAATATTGATGAGTTGCTTCTCTCTCAGCCTGACT
CAGGTGAGCAAGGGCTAGAAATTGCTGGTAAATTGATCGATTCAGGTGCAGTTGATTTGGTCGTTATTGACTCAGTTGCT
GCTCTTGTGCCACGTGCTGAGATTGATGGAGATATTGGTGATAGCCATGTTGGTCTTCAAGCTCGTATGATGAGTCAAGC
CATGCGTAAACTTGGTGCCTCAATCAATAAAACAAAGACGATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTGGGCG
TAATGTTTGGTAATCCAGAGACAACTCCTGGTGGCCGTGCGTTGAAATTCTATGCTTCTGTACGTTTGGATGTACGTGGT
AGCACTCAAATCAAAGGGACTGGCGACCAAAAAGATCAAAGTATTGGTAAAGAAACTAAGATTAAAGTCGTAAAAAACAA
AGTTGCTCCGCCATTCCAAGTGGCAGAAGTTGAAATCATGTATGGTGAAGGCATTTCACAAACAGGTGAGCTTCTTAAGA
TTGCGACAGAGTTGGATATTATCAAAAAAGCTGGCGCTTGGTTCTCATACAACGATGAGAAAATTGGCCAAGGTTCAGAA
AAAGCTAAAGAGTATCTGAAAGAACACCCTGAAGTGTTTGAAGAAATCGATCGTAAGGTTCGTTTGCACTATGGCTTGCT
TGAAGAAAGCGACGAAGAAAAAGCTGCTAAAGCAACTCCAGTTGTCGAAGAAGTTACTTCAGCACCGGAAATTGATACTG
AAGATATTGCTATTGAGCTTGAGTTGGATGATTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3L9DKE9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

84.073

99.74

0.839
  recA Streptococcus mutans UA159

82.171

100

0.828
  recA Streptococcus mitis NCTC 12261

85.714

96.615

0.828
  recA Streptococcus pyogenes NZ131

91.594

89.844

0.823
  recA Streptococcus pneumoniae TIGR4

89.08

90.625

0.807
  recA Streptococcus pneumoniae Rx1

89.08

90.625

0.807
  recA Streptococcus pneumoniae D39

89.08

90.625

0.807
  recA Streptococcus pneumoniae R6

89.08

90.625

0.807
  recA Lactococcus lactis subsp. cremoris KW2

80.286

91.146

0.732
  recA Latilactobacillus sakei subsp. sakei 23K

65.738

93.49

0.615
  recA Bacillus subtilis subsp. subtilis str. 168

68.997

85.677

0.591
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.127

88.281

0.557
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.467

84.115

0.534
  recA Glaesserella parasuis strain SC1401

60

88.542

0.531
  recA Neisseria gonorrhoeae strain FA1090

61.329

86.198

0.529
  recA Neisseria gonorrhoeae MS11

61.329

86.198

0.529
  recA Neisseria gonorrhoeae MS11

61.329

86.198

0.529
  recA Acinetobacter baylyi ADP1

59.118

88.542

0.523
  recA Acinetobacter baumannii D1279779

60.615

84.635

0.513
  recA Pseudomonas stutzeri DSM 10701

55.682

91.667

0.51
  recA Vibrio cholerae O1 biovar El Tor strain E7946

60

84.635

0.508
  recA Vibrio cholerae strain A1552

60

84.635

0.508
  recA Helicobacter pylori 26695

58.084

86.979

0.505
  recA Helicobacter pylori strain NCTC11637

58.084

86.979

0.505
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.006

86.198

0.5
  recA Ralstonia pseudosolanacearum GMI1000

59.937

82.552

0.495

Multiple sequence alignment