Detailed information NTG0103005

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AACH36_RS18385
• Genome accession: NZ_AP027939
• Coordinates: 4026279..4027343 (-)
• Length: 354 a.a.
• NCBI ID: WP_042070721.1
• Uniprot ID: A0A0K0MKD1
• Organism: Aeromonas enteropelogenes strain VA111
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4021279..4032343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH36_RS18370 (VAWG006_35960)	-	4021420..4022658 (-)	1239	WP_026456467.1	aspartate kinase	-
AACH36_RS18375 (VAWG006_35970)	alaS	4022675..4025299 (-)	2625	WP_338611326.1	alanine--tRNA ligase	-
AACH36_RS18380 (VAWG006_35980)	-	4025736..4026236 (-)	501	WP_042025150.1	regulatory protein RecX	-
AACH36_RS18385 (VAWG006_35990)	recA	4026279..4027343 (-)	1065	WP_042070721.1	recombinase RecA	Machinery gene
AACH36_RS18390 (VAWG006_36000)	-	4027424..4027915 (-)	492	WP_338611327.1	nicotinamide-nucleotide amidohydrolase family protein	-
AACH36_RS18395 (VAWG006_36010)	mutS	4028093..4030675 (+)	2583	WP_338611328.1	DNA mismatch repair protein MutS	-
AACH36_RS18400 (VAWG006_36020)	-	4030742..4031641 (-)	900	WP_338611329.1	hypothetical protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38023.68 Da
• Isoelectric Point: 4.8233

>NTDB_id=103005 AACH36_RS18385 WP_042070721.1 4026279..4027343(-) (recA) [Aeromonas enteropelogenes strain VA111]
MDQNKQKALAAALGQIEKQFGKGSIMRLGDSKTMDIEAISTGSLSLDVALGIGGLPCGRIVEIYGPESSGKTTLTLQVIA
EAQKKGKTCAFVDAEHALDPIYAAKLGVNVDDLLISQPDTGEQALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE
TRVKVVKNKVAPPFKQAEFQIFYGAGISKEGELVDLGVKHKLIDKAGAWYSYNGEKIGQGKANVMKLFAENKAMAAEVEA
KLRELLLSGVVPADDKAVVAEEDEFDVESEQEFE

Nucleotide

• Length: 1065 bp

>NTDB_id=103005 AACH36_RS18385 WP_042070721.1 4026279..4027343(-) (recA) [Aeromonas enteropelogenes strain VA111]
ATGGATCAGAACAAACAGAAGGCACTGGCGGCTGCGCTGGGTCAGATCGAAAAGCAGTTTGGCAAAGGCTCCATCATGCG
TCTGGGCGACAGCAAGACCATGGACATCGAAGCCATTTCTACCGGTTCTCTCTCCCTGGACGTGGCGCTGGGGATCGGTG
GTCTGCCATGCGGTCGTATCGTCGAGATCTACGGCCCGGAATCTTCCGGTAAAACCACCCTCACCCTGCAGGTGATCGCG
GAAGCCCAGAAGAAGGGCAAGACCTGTGCCTTCGTCGATGCAGAGCACGCACTCGACCCCATCTATGCCGCCAAACTGGG
CGTCAACGTCGATGACCTGTTGATCTCCCAGCCGGATACCGGCGAACAGGCGCTCGAGATCTGCGACATGCTGGTGCGCT
CCAACGCCGTCGACGTCATCATCGTCGACTCCGTAGCCGCCCTGACCCCGAAAGCGGAAATCGAGGGCGAGATGGGGGAC
TCCCACGTCGGCCTGCAGGCTCGTCTGATGTCCCAGGCGCTGCGCAAGCTGACCGCCAACATCAAGAACGCCAACTGCCT
GTGCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTCATGTTTGGTAGCCCGGAGACCACGACCGGTGGTAACGCAC
TGAAGTTCTATGCCTCCGTGCGTCTGGATATTCGTCGTACCGGCGCCATCAAGGAAGGGGATGAAGTGGTCGGCAACGAG
ACCCGCGTCAAGGTGGTCAAGAACAAGGTGGCCCCGCCCTTCAAGCAGGCTGAATTCCAGATTTTCTACGGCGCCGGCAT
CTCCAAAGAGGGCGAGCTGGTGGATCTGGGCGTCAAGCACAAGCTGATCGACAAGGCCGGTGCCTGGTACAGCTACAACG
GCGAGAAGATCGGTCAGGGCAAGGCCAACGTGATGAAGCTGTTTGCCGAGAACAAGGCCATGGCTGCAGAGGTAGAGGCC
AAGCTGCGCGAGCTGCTGCTCTCCGGCGTAGTTCCTGCCGATGACAAGGCGGTCGTTGCGGAAGAAGACGAGTTCGACGT
CGAAAGCGAACAAGAGTTCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A0K0MKD1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.299	98.305	0.76
recA	Vibrio cholerae strain A1552	79.268	92.655	0.734
recA	Vibrio cholerae O1 biovar El Tor strain E7946	79.268	92.655	0.734
recA	Acinetobacter baumannii D1279779	71.105	99.718	0.709
recA	Glaesserella parasuis strain SC1401	70.255	99.718	0.701
recA	Acinetobacter baylyi ADP1	71.512	97.175	0.695
recA	Ralstonia pseudosolanacearum GMI1000	73.112	93.503	0.684
recA	Neisseria gonorrhoeae MS11	72.393	92.09	0.667
recA	Neisseria gonorrhoeae MS11	72.393	92.09	0.667
recA	Neisseria gonorrhoeae strain FA1090	72.393	92.09	0.667
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.048	93.503	0.599
recA	Helicobacter pylori strain NCTC11637	61.877	96.328	0.596
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.517	90.113	0.59
recA	Helicobacter pylori 26695	61.29	96.328	0.59
recA	Bacillus subtilis subsp. subtilis str. 168	63.24	90.678	0.573
recA	Latilactobacillus sakei subsp. sakei 23K	60.059	95.48	0.573
recA	Streptococcus pneumoniae D39	61.61	91.243	0.562
recA	Streptococcus pneumoniae R6	61.61	91.243	0.562
recA	Streptococcus mitis SK321	61.61	91.243	0.562
recA	Streptococcus pneumoniae TIGR4	61.61	91.243	0.562
recA	Streptococcus pneumoniae Rx1	61.61	91.243	0.562
recA	Streptococcus mitis NCTC 12261	61.3	91.243	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.756	92.655	0.554
recA	Streptococcus pyogenes NZ131	60.681	91.243	0.554
recA	Streptococcus mutans UA159	60.681	91.243	0.554
recA	Lactococcus lactis subsp. cremoris KW2	58.204	91.243	0.531