Detailed information NTG1027407

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: NZAK3_RS08480
• Genome accession: NZ_LT009690
• Coordinates: 1703071..1704345 (+)
• Length: 424 a.a.
• NCBI ID: WP_000102729.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain NZAK3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1698071..1709345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NZAK3_RS08450	mnmA	1698273..1699391 (-)	1119	WP_000066097.1	tRNA 2-thiouridine(34) synthase MnmA	-
NZAK3_RS08455	-	1699392..1700534 (-)	1143	WP_000409157.1	cysteine desulfurase family protein	-
NZAK3_RS08460	-	1700846..1701859 (+)	1014	WP_000985878.1	LLM class flavin-dependent oxidoreductase	-
NZAK3_RS08465	-	1702096..1702242 (-)	147	WP_000009238.1	SAS049 family protein	-
NZAK3_RS08470	-	1702282..1702464 (-)	183	WP_000752909.1	CsbD family protein	-
NZAK3_RS08475	cymR	1702564..1702986 (-)	423	WP_000704122.1	cysteine metabolism transcriptional regulator CymR	-
NZAK3_RS08480	rarA	1703071..1704345 (+)	1275	WP_000102729.1	replication-associated recombination protein A	Machinery gene
NZAK3_RS08485	-	1704506..1705279 (-)	774	WP_061713877.1	tRNA threonylcarbamoyladenosine dehydratase	-
NZAK3_RS08490	-	1705279..1705407 (-)	129	WP_001790559.1	hypothetical protein	-
NZAK3_RS08500	aspS	1705740..1707506 (-)	1767	WP_000044799.1	aspartate--tRNA ligase	-
NZAK3_RS08505	hisS	1707522..1708784 (-)	1263	WP_000590826.1	histidine--tRNA ligase	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 47222.80 Da
• Isoelectric Point: 8.3526

>NTDB_id=1027407 NZAK3_RS08480 WP_000102729.1 1703071..1704345(+) (rarA) [Staphylococcus aureus strain NZAK3]
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPGIGKTSIAKAISGSTQYKFRQLNAVTNTKKD
MQLVVEEAKMSGQVILLLDEIHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYPLNDEDVRQAL
TRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNALELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDM
HYDVMSAFQKSIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTLAAIESAERLGLPEARIPLSQ
AVIELCLSPKSNSAMSAIDSALSDIRNGHVGQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP

Nucleotide

• Length: 1275 bp

>NTDB_id=1027407 NZAK3_RS08480 WP_000102729.1 1703071..1704345(+) (rarA) [Staphylococcus aureus strain NZAK3]
GTGAGTACAGAACCATTAGCATCGAGAATGCGCCCAAAAAATATAGATGAAATCATTTCCCAACAACATTTAGTTGGACC
AAAAGGCATTATCAGAAGAATGGTTGACACAAAAAAATTAACTTCAATGATTTTTTATGGTCCACCTGGTATAGGCAAAA
CAAGTATTGCCAAAGCAATTTCGGGCAGTACGCAATATAAATTCAGACAATTGAATGCTGTAACTAACACTAAAAAAGAT
ATGCAACTTGTTGTTGAAGAAGCTAAAATGTCTGGTCAAGTTATCTTGTTGTTAGATGAAATACATCGACTAGATAAAGC
TAAACAAGACTTTTTATTACCTCATTTAGAAAATGGCAAAATCGTCTTGATTGGTGCTACAACTTCAAATCCTTATCATG
CTATCAATCCAGCGATTCGTTCAAGAGCGCAAATTTTCGAGTTATATCCTTTAAATGACGAAGATGTGCGCCAAGCGTTA
ACTCGTGCAATAGAAGATGATGAGAATGGTTTGAAAACATATCAACCCAAAATTGATGAAGATGCCATGACCTACTTTTC
TACACAAAGCCAAGGTGATGTTCGTAGTGCGTTAAATGCATTGGAATTAGCTGTATTAAGCGCAGATAATGACAAAGACG
GTTATCGACATGTTACATTGCAAGATGCTAAAGACTGTTTACAAAAAGGTGCATTTGTAAGTGATAAGGATGGTGACATG
CATTACGATGTTATGAGCGCTTTCCAAAAATCTATCCGTGGTAGCGACGTCAATGCCGCTTTACATTATTTAGCACGATT
AATTGAAGCTGGAGATTTACCTACAATAGTTCGACGATTACTTGTAATTAGCTATGAGGATATAGGCTTAGCCTCACCTA
ATGCTGGTCAGAGAACACTTGCTGCTATTGAATCAGCAGAACGTCTAGGTTTACCAGAAGCTAGAATTCCACTAAGCCAA
GCAGTAATCGAACTATGCTTATCACCTAAGTCAAATTCAGCAATGAGTGCCATTGATAGTGCATTGTCCGATATTAGAAA
CGGTCATGTGGGTCAAATTCCAAATCATTTAAAAGATGGACATTATCAAGGTGCTAAAGATCTAGGCCGATCTATTGGTT
ACAAATATCCACACCAATATGTTAATGGCTATGTTTCACAGCAATATTTACCTGATAAACTTAAAAACAAAATTTATTAT
GAACCAAAAACGACATCTAAAAGTGAACAACAACTCAAAGAAATATATAACAACTTACTTAAACAAAGGCCGTAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (175-253)

• ATPase family associated with various cellular activities (AAA) (AAA) (43-145)

• MgsA AAA+ ATPase C terminal (MgsA_C) (254-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	69.048	99.057	0.684