Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | AB4P95_RS15640 | Genome accession | NZ_CP162583 |
| Coordinates | 3350140..3351198 (-) | Length | 352 a.a. |
| NCBI ID | WP_042557927.1 | Uniprot ID | A0A9X4BXU9 |
| Organism | Pseudomonas sp. A1437 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3349663..3389218 | 3350140..3351198 | within | 0 |
Gene organization within MGE regions
Location: 3349663..3389218
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4P95_RS15635 (AB4P95_15610) | recX | 3349663..3350130 (-) | 468 | WP_115146419.1 | recombination regulator RecX | - |
| AB4P95_RS15640 (AB4P95_15615) | recA | 3350140..3351198 (-) | 1059 | WP_042557927.1 | recombinase RecA | Machinery gene |
| AB4P95_RS15645 (AB4P95_15620) | - | 3351282..3351782 (-) | 501 | WP_115146418.1 | CinA family protein | - |
| AB4P95_RS15650 (AB4P95_15625) | - | 3351850..3352368 (-) | 519 | WP_115146417.1 | lysis system i-spanin subunit Rz | - |
| AB4P95_RS15655 (AB4P95_15630) | - | 3352347..3352913 (-) | 567 | WP_395599270.1 | glycoside hydrolase family 19 protein | - |
| AB4P95_RS15660 (AB4P95_15635) | - | 3353027..3353473 (-) | 447 | WP_395599271.1 | phage tail assembly chaperone | - |
| AB4P95_RS15665 (AB4P95_15640) | - | 3353474..3354337 (-) | 864 | WP_395599272.1 | gp53-like domain-containing protein | - |
| AB4P95_RS15670 (AB4P95_15645) | - | 3354395..3354961 (-) | 567 | WP_261735132.1 | tail fiber assembly protein | - |
| AB4P95_RS15675 (AB4P95_15650) | - | 3354969..3356066 (-) | 1098 | WP_261735131.1 | phage tail protein | - |
| AB4P95_RS15680 (AB4P95_15655) | - | 3356256..3356645 (-) | 390 | WP_200613614.1 | phage tail assembly chaperone | - |
| AB4P95_RS15685 (AB4P95_15660) | - | 3356648..3357583 (-) | 936 | WP_234451706.1 | hypothetical protein | - |
| AB4P95_RS15690 (AB4P95_15665) | - | 3357596..3358195 (-) | 600 | WP_042557915.1 | YmfQ family protein | - |
| AB4P95_RS15695 (AB4P95_15670) | - | 3358183..3359229 (-) | 1047 | WP_042557914.1 | baseplate J/gp47 family protein | - |
| AB4P95_RS15700 (AB4P95_15675) | - | 3359219..3359617 (-) | 399 | WP_042557913.1 | phage GP46 family protein | - |
| AB4P95_RS15705 (AB4P95_15680) | - | 3359617..3360126 (-) | 510 | WP_395599273.1 | phage baseplate assembly protein V | - |
| AB4P95_RS15710 (AB4P95_15685) | - | 3360241..3361287 (-) | 1047 | WP_261735128.1 | phage baseplate assembly protein | - |
| AB4P95_RS15715 (AB4P95_15690) | - | 3361291..3362526 (-) | 1236 | WP_395599274.1 | DNA circularization protein | - |
| AB4P95_RS15720 (AB4P95_15695) | - | 3362513..3364075 (-) | 1563 | WP_395599275.1 | phage tail protein | - |
| AB4P95_RS15725 (AB4P95_15700) | - | 3364206..3364502 (-) | 297 | WP_007908778.1 | phage tail assembly protein | - |
| AB4P95_RS15730 (AB4P95_15705) | - | 3364499..3364846 (-) | 348 | WP_042557909.1 | phage tail tube protein | - |
| AB4P95_RS15735 (AB4P95_15710) | - | 3364914..3366410 (-) | 1497 | WP_395599276.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| AB4P95_RS15740 (AB4P95_15715) | - | 3366410..3366592 (-) | 183 | WP_003222219.1 | DUF2635 domain-containing protein | - |
| AB4P95_RS15745 (AB4P95_15720) | - | 3366589..3367173 (-) | 585 | WP_395599277.1 | hypothetical protein | - |
| AB4P95_RS15750 (AB4P95_15725) | - | 3367320..3368336 (-) | 1017 | WP_047299937.1 | phage-like tail protein | - |
| AB4P95_RS15755 (AB4P95_15730) | - | 3368346..3368558 (-) | 213 | WP_047299936.1 | tail protein X | - |
| AB4P95_RS15760 (AB4P95_15735) | - | 3368551..3368934 (-) | 384 | WP_047299935.1 | phage tail protein | - |
| AB4P95_RS15765 (AB4P95_15740) | - | 3368934..3371132 (-) | 2199 | WP_395599278.1 | phage tail tape measure protein | - |
| AB4P95_RS15770 (AB4P95_15745) | - | 3371261..3371842 (-) | 582 | WP_395599279.1 | phage tail assembly protein | - |
| AB4P95_RS15775 (AB4P95_15750) | - | 3372014..3372520 (-) | 507 | WP_047299932.1 | phage major tail tube protein | - |
| AB4P95_RS15780 (AB4P95_15755) | - | 3372520..3373686 (-) | 1167 | WP_115146400.1 | phage tail protein | - |
| AB4P95_RS15785 (AB4P95_15760) | - | 3373689..3373874 (-) | 186 | WP_395599280.1 | hypothetical protein | - |
| AB4P95_RS15790 (AB4P95_15765) | - | 3373974..3374516 (-) | 543 | WP_395599281.1 | DUF4376 domain-containing protein | - |
| AB4P95_RS15795 (AB4P95_15770) | - | 3374528..3377020 (-) | 2493 | WP_395599282.1 | phage tail protein | - |
| AB4P95_RS15800 (AB4P95_15775) | - | 3377021..3377656 (-) | 636 | WP_395599283.1 | phage tail protein I | - |
| AB4P95_RS15805 (AB4P95_15780) | - | 3377653..3378648 (-) | 996 | WP_395599284.1 | baseplate J/gp47 family protein | - |
| AB4P95_RS15810 (AB4P95_15785) | - | 3378645..3378977 (-) | 333 | WP_016985063.1 | phage baseplate protein | - |
| AB4P95_RS15815 (AB4P95_15790) | - | 3378992..3379600 (-) | 609 | WP_200613671.1 | phage baseplate assembly protein V | - |
| AB4P95_RS15820 (AB4P95_15795) | - | 3379604..3380125 (-) | 522 | WP_395599285.1 | hypothetical protein | - |
| AB4P95_RS15825 (AB4P95_15800) | - | 3380197..3380535 (-) | 339 | WP_047299923.1 | phage holin family protein | - |
| AB4P95_RS15830 (AB4P95_15805) | - | 3381061..3381804 (-) | 744 | WP_080895993.1 | XRE family transcriptional regulator | - |
| AB4P95_RS15835 (AB4P95_15810) | mutS | 3382007..3384586 (+) | 2580 | WP_115146394.1 | DNA mismatch repair protein MutS | - |
| AB4P95_RS15840 (AB4P95_15815) | fdxA | 3384750..3385073 (+) | 324 | WP_007908827.1 | ferredoxin FdxA | - |
| AB4P95_RS15845 (AB4P95_15820) | rpoS | 3385594..3386604 (-) | 1011 | WP_047299921.1 | RNA polymerase sigma factor RpoS | - |
| AB4P95_RS15850 (AB4P95_15825) | - | 3386711..3387580 (-) | 870 | WP_261735118.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| AB4P95_RS15855 (AB4P95_15830) | - | 3387792..3388427 (-) | 636 | WP_170947254.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| AB4P95_RS15860 (AB4P95_15835) | surE | 3388469..3389218 (-) | 750 | WP_042557899.1 | 5'/3'-nucleotidase SurE | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37532.20 Da Isoelectric Point: 5.8791
>NTDB_id=1027206 AB4P95_RS15640 WP_042557927.1 3350140..3351198(-) (recA) [Pseudomonas sp. A1437]
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQGKANSAKFLADNPEIAKKLEK
QLRDKLLAPAADVKASLAKDKVDDMAEADVDV
MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYEGTKIGQGKANSAKFLADNPEIAKKLEK
QLRDKLLAPAADVKASLAKDKVDDMAEADVDV
Nucleotide
Download Length: 1059 bp
>NTDB_id=1027206 AB4P95_RS15640 WP_042557927.1 3350140..3351198(-) (recA) [Pseudomonas sp. A1437]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTGATGCG
TATGGGCGATCAGGACCGTCAGGCGATCCCGGCTATCTCCACTGGCTCTCTGGGTCTGGACATTGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACACTGACACTGTCCGTGATCGCC
CAGGCTCAAAAAGCTGGCGCGACCTGCGCATTCGTCGACGCCGAACACGCCCTCGACCCTGAGTACGCCGGCAAACTGGG
CGTCAACGTTGATGACCTGCTGGTTTCCCAGCCTGACACCGGCGAACAAGCTCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCGTTGACGTGATCATCGTCGACTCCGTGGCTGCACTGGTGCCGAAGGCTGAAATCGAAGGCGAAATGGGTGAC
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTTATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTCGACATCCGCCGTACTGGCGCGGTGAAAGAAGGCGACGAAGTGGTCGGCAGCGAA
ACTCGCGTCAAGGTTGTGAAAAACAAGGTGGCTTCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAACGGCGAGATGATCGACCTGGGCGTGCTGCACGGCTTCGTCGAGAAGTCCGGCGCCTGGTACGCCTATGAAG
GCACCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCAGACAATCCGGAAATCGCCAAGAAGCTCGAGAAG
CAACTGCGTGACAAACTGTTGGCCCCGGCGGCAGACGTCAAGGCTTCGCTGGCCAAGGACAAAGTCGACGATATGGCTGA
GGCCGATGTCGACGTTTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTGATGCG
TATGGGCGATCAGGACCGTCAGGCGATCCCGGCTATCTCCACTGGCTCTCTGGGTCTGGACATTGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACACTGACACTGTCCGTGATCGCC
CAGGCTCAAAAAGCTGGCGCGACCTGCGCATTCGTCGACGCCGAACACGCCCTCGACCCTGAGTACGCCGGCAAACTGGG
CGTCAACGTTGATGACCTGCTGGTTTCCCAGCCTGACACCGGCGAACAAGCTCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCGTTGACGTGATCATCGTCGACTCCGTGGCTGCACTGGTGCCGAAGGCTGAAATCGAAGGCGAAATGGGTGAC
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTTATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGTAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCCTCGGTTCGTCTCGACATCCGCCGTACTGGCGCGGTGAAAGAAGGCGACGAAGTGGTCGGCAGCGAA
ACTCGCGTCAAGGTTGTGAAAAACAAGGTGGCTTCGCCGTTCCGTCAGGCCGAGTTCCAGATTCTTTACGGCAAGGGCAT
CTACCTCAACGGCGAGATGATCGACCTGGGCGTGCTGCACGGCTTCGTCGAGAAGTCCGGCGCCTGGTACGCCTATGAAG
GCACCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCAGACAATCCGGAAATCGCCAAGAAGCTCGAGAAG
CAACTGCGTGACAAACTGTTGGCCCCGGCGGCAGACGTCAAGGCTTCGCTGGCCAAGGACAAAGTCGACGATATGGCTGA
GGCCGATGTCGACGTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.