Detailed information NTG1022244

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: AB2N10_RS15600
• Genome accession: NZ_CP160906
• Coordinates: 3416500..3417546 (+)
• Length: 348 a.a.
• NCBI ID: WP_354623290.1
• Uniprot ID: -
• Organism: Psychromonas sp. MME1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3411500..3422546

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB2N10_RS15575	-	3411663..3412706 (+)	1044	WP_369434079.1	cache domain-containing protein	-
AB2N10_RS15580	-	3412887..3413255 (+)	369	WP_354623287.1	PH domain-containing protein	-
AB2N10_RS15585	mutS	3413310..3415880 (-)	2571	WP_354623288.1	DNA mismatch repair protein MutS	-
AB2N10_RS15590	-	3415922..3416302 (+)	381	WP_369434080.1	CinA family protein	-
AB2N10_RS15595	-	3416289..3416411 (+)	123	WP_369434682.1	hypothetical protein	-
AB2N10_RS15600	recA	3416500..3417546 (+)	1047	WP_354623290.1	recombinase RecA	Machinery gene
AB2N10_RS15605	-	3417765..3419378 (+)	1614	WP_354623291.1	mechanosensitive ion channel family protein	-
AB2N10_RS15610	alaS	3419620..3422223 (+)	2604	WP_369434683.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37470.04 Da
• Isoelectric Point: 5.5498

>NTDB_id=1022244 AB2N10_RS15600 WP_354623290.1 3416500..3417546(+) (recA) [Psychromonas sp. MME1]
MSQDTNKDKALAAALGQIEKQFGKGSIMRLGDGSAAMMEIESVSTGSLGLDVALGIGGLPFGRVVEIYGPESSGKTTLTL
QVIAEAQKMGKTCAFIDAEHALDPIYAKKLGVDTDSLLISQPDTGEQALEICDMLVRSGAVNVVIIDSVAALTPKAEIEG
DMGDSHMGLQARLMSQALRKLTGNIKQTNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKDGDEI
TGNETRVKVVKNKVSPPFKEANFQILYGEGINHTGELVDLGVKLDFVEKSGSWYAYNGTKIGQGKNNACNYLRENPEIAK
ELDTRIREALMPKVEKTEKAPGKEAITE

Nucleotide

• Length: 1047 bp

>NTDB_id=1022244 AB2N10_RS15600 WP_354623290.1 3416500..3417546(+) (recA) [Psychromonas sp. MME1]
ATGAGTCAGGATACAAACAAAGATAAAGCATTAGCTGCAGCACTTGGTCAGATTGAAAAGCAATTTGGTAAAGGATCAAT
TATGCGTTTAGGCGATGGTTCAGCGGCAATGATGGAGATTGAATCTGTTTCAACTGGCTCACTCGGTTTAGATGTCGCAT
TGGGTATAGGCGGATTACCATTTGGACGTGTTGTGGAAATTTATGGCCCAGAAAGTTCAGGTAAAACTACATTAACATTA
CAAGTGATTGCCGAAGCGCAAAAAATGGGTAAAACCTGTGCCTTTATTGACGCGGAACATGCACTTGACCCTATCTATGC
TAAAAAATTAGGTGTCGATACTGATAGTTTACTTATTTCTCAGCCAGATACCGGCGAGCAAGCACTCGAAATTTGTGACA
TGTTAGTCCGTTCGGGCGCGGTCAACGTGGTGATTATTGACTCCGTTGCAGCTTTGACACCCAAAGCTGAAATAGAAGGG
GATATGGGTGATTCACACATGGGCCTACAGGCTCGTTTGATGTCACAAGCATTACGTAAATTAACGGGTAATATTAAGCA
AACAAACTGCTTGGTTATCTTTATCAACCAGATTCGTATGAAAATAGGTGTGATGTTTGGTAACCCTGAAACAACAACCG
GTGGTAATGCACTTAAATTTTATGCCTCGGTGCGCTTAGATATTCGTCGTATTGGCGCAATTAAAGATGGTGATGAAATA
ACTGGTAATGAAACTCGCGTTAAGGTTGTTAAGAATAAAGTATCTCCACCGTTTAAAGAGGCTAATTTTCAAATTCTATA
TGGCGAGGGTATTAATCATACCGGTGAACTTGTTGACCTTGGTGTTAAACTTGATTTTGTCGAAAAATCAGGATCTTGGT
ATGCTTATAATGGGACTAAAATTGGTCAAGGTAAGAATAATGCCTGTAATTATTTGCGAGAAAATCCGGAAATTGCTAAA
GAACTTGATACGAGAATACGTGAAGCGTTAATGCCGAAGGTTGAGAAAACGGAAAAAGCGCCAGGAAAAGAGGCCATCAC
AGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	78.354	94.253	0.739
recA	Vibrio cholerae O1 biovar El Tor strain E7946	78.354	94.253	0.739
recA	Glaesserella parasuis strain SC1401	73.977	98.276	0.727
recA	Pseudomonas stutzeri DSM 10701	73.333	99.138	0.727
recA	Acinetobacter baylyi ADP1	71.884	99.138	0.713
recA	Acinetobacter baumannii D1279779	74.39	94.253	0.701
recA	Ralstonia pseudosolanacearum GMI1000	75.08	89.943	0.675
recA	Neisseria gonorrhoeae MS11	71.865	93.966	0.675
recA	Neisseria gonorrhoeae MS11	71.865	93.966	0.675
recA	Neisseria gonorrhoeae strain FA1090	71.865	93.966	0.675
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.798	96.839	0.618
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.329	94.253	0.606
recA	Helicobacter pylori 26695	62.84	95.115	0.598
recA	Helicobacter pylori strain NCTC11637	62.84	95.115	0.598
recA	Bacillus subtilis subsp. subtilis str. 168	63.272	93.103	0.589
recA	Streptococcus mutans UA159	58.046	100	0.58
recA	Streptococcus pneumoniae R6	61.162	93.966	0.575
recA	Streptococcus pneumoniae TIGR4	61.162	93.966	0.575
recA	Streptococcus pneumoniae Rx1	61.162	93.966	0.575
recA	Streptococcus pneumoniae D39	61.162	93.966	0.575
recA	Streptococcus mitis NCTC 12261	61.231	93.391	0.572
recA	Latilactobacillus sakei subsp. sakei 23K	60.486	94.54	0.572
recA	Lactococcus lactis subsp. cremoris KW2	60.55	93.966	0.569
recA	Streptococcus mitis SK321	60.55	93.966	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.308	93.391	0.563
recA	Streptococcus pyogenes NZ131	59.692	93.391	0.557