Detailed information NTG1020499

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABU615_RS08130
• Genome accession: NZ_CP160328
• Coordinates: 1813560..1814609 (+)
• Length: 349 a.a.
• NCBI ID: WP_367431260.1
• Uniprot ID: -
• Organism: Snodgrassella alvi strain Acer08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1808560..1819609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU615_RS08100 (ABU615_15290)	-	1808776..1810194 (-)	1419	WP_370388808.1	exonuclease domain-containing protein	-
ABU615_RS08115 (ABU615_03825)	-	1810677..1811393 (-)	717	WP_370388809.1	SIMPL domain-containing protein	-
ABU615_RS08125 (ABU615_03810)	-	1811725..1813134 (-)	1410	WP_370386576.1	DEAD/DEAH box helicase	-
ABU615_RS08130 (ABU615_03805)	recA	1813560..1814609 (+)	1050	WP_367431260.1	recombinase RecA	Machinery gene
ABU615_RS08135 (ABU615_03800)	trpE	1814842..1816317 (+)	1476	WP_370388810.1	anthranilate synthase component I	-
ABU615_RS08140 (ABU615_15295)	modD	1816493..1817338 (-)	846	WP_370388811.1	ModD protein	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37575.95 Da
• Isoelectric Point: 4.8779

>NTDB_id=1020499 ABU615_RS08130 WP_367431260.1 1813560..1814609(+) (recA) [Snodgrassella alvi strain Acer08]
MSDEKSKALAAALAQIERSFGKGSIMKMDGSHTDENLEVISTGSLGLDLALGVGGLPRGRIVEIYGPESSGKTTLCLEAI
AQCQKGGGTCAFIDAENAFDPIYARKLGVKVEELLVSQPDTGEQALEICDMLVRSGGVDMVVVDSVAALVPKAEIEGEMG
DSHVGLQARLMSQALRKLTGNIKKTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRKIGQIKKGDDVIGN
ETRVKVIKNKVAPPFKQAEFDILYGEGVSWEGELIDIGVKLGIVEKAGAWYSYNGSKIGQGKDNVRQWLKDNPEIANEIN
FKIRNKVGITAQNTEGQLDETDGEAPVDE

Nucleotide

• Length: 1050 bp

>NTDB_id=1020499 ABU615_RS08130 WP_367431260.1 1813560..1814609(+) (recA) [Snodgrassella alvi strain Acer08]
ATGTCAGATGAAAAAAGCAAAGCACTGGCTGCGGCCCTAGCCCAAATAGAAAGAAGTTTTGGTAAAGGTTCCATCATGAA
AATGGATGGCAGCCATACTGATGAAAACCTTGAAGTCATTTCTACCGGTTCACTTGGACTAGACTTGGCTTTGGGCGTAG
GTGGCCTACCCAGAGGTCGTATTGTAGAAATCTACGGTCCAGAATCATCCGGTAAAACCACACTCTGTCTAGAAGCCATT
GCTCAATGTCAGAAAGGTGGAGGTACCTGCGCCTTTATCGATGCCGAAAATGCCTTTGACCCCATCTATGCACGTAAACT
AGGTGTAAAAGTTGAAGAATTATTGGTTTCCCAACCGGATACCGGTGAACAGGCTCTGGAGATCTGTGACATGCTGGTAC
GCAGTGGTGGTGTAGATATGGTTGTCGTTGACTCCGTTGCTGCACTGGTACCTAAAGCTGAAATCGAAGGCGAAATGGGT
GACAGCCATGTTGGTTTACAGGCTCGTCTGATGAGTCAGGCCTTACGCAAATTAACTGGTAACATTAAAAAAACCAACAC
ACTGGTTATCTTTATCAACCAGATTCGCATGAAAATCGGCGTAATGTTTGGAAACCCTGAAACCACGACTGGCGGTAATG
CACTTAAATTTTACTCATCCGTACGATTGGATATCCGCAAAATCGGCCAGATTAAAAAAGGGGATGACGTCATTGGTAAC
GAAACACGCGTGAAAGTGATTAAAAACAAAGTTGCTCCGCCGTTTAAGCAAGCCGAATTTGATATTTTATATGGCGAAGG
CGTAAGCTGGGAGGGAGAACTGATAGATATTGGCGTTAAACTGGGTATCGTTGAAAAAGCTGGTGCTTGGTACAGCTACA
ATGGCAGCAAAATTGGTCAGGGTAAAGATAATGTACGCCAGTGGCTTAAAGACAACCCAGAAATTGCCAATGAAATCAAT
TTTAAAATTCGCAACAAAGTCGGTATCACTGCGCAGAATACCGAAGGGCAACTGGACGAAACTGACGGTGAAGCACCAGT
TGACGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Neisseria gonorrhoeae MS11	84.971	99.14	0.842
recA	Neisseria gonorrhoeae MS11	84.971	99.14	0.842
recA	Neisseria gonorrhoeae strain FA1090	84.971	99.14	0.842
recA	Ralstonia pseudosolanacearum GMI1000	75.758	94.556	0.716
recA	Pseudomonas stutzeri DSM 10701	71.642	95.989	0.688
recA	Acinetobacter baylyi ADP1	69.767	98.567	0.688
recA	Acinetobacter baumannii D1279779	68.497	99.14	0.679
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.605	92.837	0.665
recA	Vibrio cholerae strain A1552	71.605	92.837	0.665
recA	Glaesserella parasuis strain SC1401	70.859	93.41	0.662
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.372	94.842	0.639
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.516	97.708	0.63
recA	Bacillus subtilis subsp. subtilis str. 168	66.565	94.269	0.628
recA	Streptococcus mutans UA159	63.018	96.848	0.61
recA	Streptococcus pneumoniae R6	59.551	100	0.607
recA	Streptococcus pneumoniae D39	59.551	100	0.607
recA	Streptococcus pneumoniae TIGR4	59.551	100	0.607
recA	Streptococcus pneumoniae Rx1	59.551	100	0.607
recA	Helicobacter pylori 26695	63.83	94.269	0.602
recA	Helicobacter pylori strain NCTC11637	63.83	94.269	0.602
recA	Latilactobacillus sakei subsp. sakei 23K	64.024	93.983	0.602
recA	Streptococcus mitis NCTC 12261	58.543	100	0.599
recA	Streptococcus pyogenes NZ131	62.121	94.556	0.587
recA	Streptococcus mitis SK321	61.818	94.556	0.585
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.92	92.55	0.573
recA	Lactococcus lactis subsp. cremoris KW2	60.303	94.556	0.57