Detailed information NTG1009520

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABHF91_RS13950
• Genome accession: NZ_CP158016
• Coordinates: 2965660..2966736 (-)
• Length: 358 a.a.
• NCBI ID: WP_409420863.1
• Uniprot ID: -
• Organism: Pseudaeromonas sp. ZJS20
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2960660..2971736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABHF91_RS13930 (ABHF91_13915)	csrA	2960890..2961087 (-)	198	WP_345012225.1	carbon storage regulator CsrA	-
ABHF91_RS13935 (ABHF91_13920)	-	2961172..2962416 (-)	1245	WP_409420860.1	aspartate kinase	-
ABHF91_RS13940 (ABHF91_13925)	alaS	2962437..2965061 (-)	2625	WP_409420861.1	alanine--tRNA ligase	-
ABHF91_RS13945 (ABHF91_13930)	-	2965178..2965645 (-)	468	WP_409420862.1	regulatory protein RecX	-
ABHF91_RS13950 (ABHF91_13935)	recA	2965660..2966736 (-)	1077	WP_409420863.1	recombinase RecA	Machinery gene
ABHF91_RS13955 (ABHF91_13940)	-	2966807..2967304 (-)	498	WP_409420864.1	CinA family protein	-
ABHF91_RS13960 (ABHF91_13945)	mutS	2967342..2969915 (+)	2574	WP_409420865.1	DNA mismatch repair protein MutS	-
ABHF91_RS13965 (ABHF91_13950)	rpoS	2969972..2970946 (-)	975	WP_409420866.1	RNA polymerase sigma factor RpoS	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38162.63 Da
• Isoelectric Point: 4.7172

>NTDB_id=1009520 ABHF91_RS13950 WP_409420863.1 2965660..2966736(-) (recA) [Pseudaeromonas sp. ZJS20]
MDQNKQKALAAALGQIEKQFGKGSIMRLGDTQALDVDTVSTGSLSLDIALGIGGLPFGRIVEIFGPESSGKTTLTLEVIA
QAQKAGKTCAFIDAEHALDPIYAGKLGVKVDDLLVSQPDTGEQALEICDMLVRSNAVDVIIVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTGNIKGANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEIVGNE
TRVKVVKNKVAPPFKQAEFQILYGAGISKESELVDLGVKCKLIDKAGAWYSYQGEKIGQGKANVMKYMQENLPVAEAIER
QLRELLLSNQGGNESAGANEAGDVAELDDEASFADNAF

Nucleotide

• Length: 1077 bp

>NTDB_id=1009520 ABHF91_RS13950 WP_409420863.1 2965660..2966736(-) (recA) [Pseudaeromonas sp. ZJS20]
ATGGATCAGAACAAACAGAAAGCCTTGGCCGCCGCCTTGGGTCAGATCGAAAAGCAATTCGGCAAGGGCTCCATCATGCG
GTTAGGCGATACCCAGGCGCTGGATGTGGATACCGTTTCGACGGGCTCCTTGTCGCTGGACATCGCCCTGGGGATCGGCG
GTCTGCCGTTTGGTCGCATCGTGGAGATCTTCGGACCCGAGTCCTCCGGTAAGACCACCCTGACCCTGGAAGTCATCGCC
CAGGCCCAGAAGGCGGGCAAGACCTGTGCGTTTATCGACGCCGAACACGCCCTGGATCCCATCTATGCCGGCAAGTTGGG
GGTCAAGGTGGATGATCTGCTGGTCTCCCAACCGGATACCGGGGAACAGGCGCTGGAAATCTGCGACATGCTGGTGCGCT
CCAATGCCGTCGACGTCATCATAGTCGACTCGGTGGCGGCCCTGACGCCCAAGGCGGAAATCGAAGGCGAGATGGGGGAT
TCCCACGTCGGCCTGCAGGCACGCCTCATGTCCCAGGCGCTGCGTAAGCTCACCGGCAACATCAAGGGTGCCAACTGCCT
GGTGGTGTTTATCAACCAGATCCGGATGAAGATCGGCGTCATGTTCGGCAACCCGGAAACCACCACCGGCGGTAACGCCC
TCAAGTTCTATGCCTCCGTGCGTCTGGATATCCGCCGGACCGGCGCCATCAAGGAAGGGGACGAGATCGTCGGCAACGAG
ACCCGGGTCAAGGTGGTCAAGAACAAGGTGGCGCCCCCCTTCAAACAGGCCGAGTTCCAGATCCTCTACGGTGCCGGTAT
CTCCAAGGAAAGCGAATTGGTGGACCTGGGGGTCAAGTGCAAGCTCATCGACAAGGCCGGTGCCTGGTACAGCTATCAGG
GCGAGAAGATTGGTCAGGGCAAGGCTAACGTCATGAAATACATGCAGGAGAACCTGCCGGTGGCCGAAGCCATCGAACGC
CAGCTGCGGGAGCTGCTGCTGAGCAATCAGGGCGGGAACGAGAGCGCCGGCGCCAACGAGGCGGGTGACGTGGCCGAGCT
GGATGACGAGGCCAGCTTCGCCGATAACGCCTTCTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	76.081	96.927	0.737
recA	Vibrio cholerae O1 biovar El Tor strain E7946	76.081	96.927	0.737
recA	Pseudomonas stutzeri DSM 10701	75.862	97.207	0.737
recA	Acinetobacter baumannii D1279779	76.22	91.62	0.698
recA	Glaesserella parasuis strain SC1401	71.225	98.045	0.698
recA	Acinetobacter baylyi ADP1	72.046	96.927	0.698
recA	Neisseria gonorrhoeae MS11	72.393	91.061	0.659
recA	Neisseria gonorrhoeae MS11	72.393	91.061	0.659
recA	Neisseria gonorrhoeae strain FA1090	72.393	91.061	0.659
recA	Ralstonia pseudosolanacearum GMI1000	73.955	86.872	0.642
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.198	90.503	0.581
recA	Bacillus subtilis subsp. subtilis str. 168	62.31	91.899	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.631	92.458	0.57
recA	Helicobacter pylori strain NCTC11637	61.631	92.458	0.57
recA	Helicobacter pylori 26695	61.329	92.458	0.567
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.162	91.341	0.559
recA	Streptococcus mitis SK321	61.61	90.223	0.556
recA	Streptococcus pneumoniae Rx1	61.61	90.223	0.556
recA	Streptococcus pneumoniae D39	61.61	90.223	0.556
recA	Streptococcus pneumoniae R6	61.61	90.223	0.556
recA	Streptococcus pneumoniae TIGR4	61.61	90.223	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	62.382	89.106	0.556
recA	Streptococcus mitis NCTC 12261	61.3	90.223	0.553
recA	Streptococcus pyogenes NZ131	60.062	90.223	0.542
recA	Streptococcus mutans UA159	59.752	90.223	0.539
recA	Lactococcus lactis subsp. cremoris KW2	58.204	90.223	0.525