Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   ABKA15_RS00515 Genome accession   NZ_CP157941
Coordinates   104458..105591 (+) Length   377 a.a.
NCBI ID   WP_049514654.1    Uniprot ID   A0A7L8W7L7
Organism   Streptococcus sp. KHUD_010     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 99458..110591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS00510 (ABKA15_00510) cinA 103142..104410 (+) 1269 WP_049514652.1 competence/damage-inducible protein A Machinery gene
  ABKA15_RS00515 (ABKA15_00515) recA 104458..105591 (+) 1134 WP_049514654.1 recombinase RecA Machinery gene
  ABKA15_RS00520 (ABKA15_00520) spx 105678..106076 (+) 399 WP_049514656.1 transcriptional regulator Spx -
  ABKA15_RS00525 (ABKA15_00525) - 106159..106728 (+) 570 WP_049514657.1 SP0191 family lipoprotein -
  ABKA15_RS00530 (ABKA15_00530) - 106833..107390 (+) 558 WP_049514659.1 SP0191 family lipoprotein -
  ABKA15_RS00535 (ABKA15_00535) - 107513..107779 (+) 267 WP_009569646.1 IreB family regulatory phosphoprotein -
  ABKA15_RS00540 (ABKA15_00540) ruvX 107779..108198 (+) 420 WP_049514661.1 Holliday junction resolvase RuvX -
  ABKA15_RS00545 (ABKA15_00545) - 108216..108527 (+) 312 WP_003027765.1 DUF1292 domain-containing protein -
  ABKA15_RS00550 (ABKA15_00550) - 108728..109969 (+) 1242 WP_049514662.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  ABKA15_RS00555 (ABKA15_00555) - 110018..110455 (+) 438 WP_049514664.1 SP_0198 family lipoprotein -

Sequence

Protein


Download         Length: 377 a.a.        Molecular weight: 40911.49 Da        Isoelectric Point: 4.8122

>NTDB_id=1009081 ABKA15_RS00515 WP_049514654.1 104458..105591(+) (recA) [Streptococcus sp. KHUD_010]
MAKKQKKLEEISKKFGEERQKALDTALKNIEKDFGKGAIMRLGERAEQKVQVMSSGSLALDIALGAGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAQALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKTIAIFINQLREKVGIMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDEKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELIKIATDLDIIKKAGAWYSYNDEKIGQGSE
NAKKYLADHPEIFEEIDHKVRVHYGLIEDDTEDEKDAEANKVEEVTLDLDDAIEIEE

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=1009081 ABKA15_RS00515 WP_049514654.1 104458..105591(+) (recA) [Streptococcus sp. KHUD_010]
ATGGCGAAAAAACAAAAAAAATTAGAAGAAATTTCAAAGAAATTTGGCGAGGAACGTCAAAAAGCACTAGATACTGCACT
TAAAAATATTGAAAAAGATTTTGGCAAAGGGGCGATTATGCGCCTAGGTGAGCGCGCTGAACAAAAAGTTCAAGTCATGA
GTTCAGGTAGCTTGGCGCTAGATATCGCTCTTGGTGCAGGAGGGTATCCAAAGGGGCGGATTATTGAAATCTATGGACCA
GAGTCTTCTGGTAAGACGACCGTAGCTCTTCATGCAGTAGCGCAAGCTCAAAAAGAAGGCGGTATTGCAGCTTTTATTGA
TGCAGAACACGCTCTTGACCCGGCTTATGCACAAGCCCTTGGAGTTAATATTGATGAACTCTTACTTTCTCAGCCAGACT
CTGGTGAGCAAGGTCTTGAGATTGCTGGGAAATTGATTGACTCTGGTGCGGTAGATTTGGTAGTTATTGACTCCGTGGCA
GCCCTCGTACCACGTGCTGAGATTGATGGAGACATTGGAGATAGTCACGTTGGTTTGCAAGCGCGGATGATGAGTCAAGC
TATGCGTAAATTGTCTGCTTCTATTAACAAAACGAAGACAATTGCGATTTTCATCAACCAATTGCGTGAAAAAGTTGGTA
TTATGTTTGGAAATCCAGAAACAACACCTGGTGGTCGTGCCTTGAAATTTTATGCGTCTGTTCGTTTGGATGTTCGCGGG
AATACCCAAATCAAGGGAACTGGTGATGAAAAAGATACCAATGTTGGTAAGGAAACTAAAATTAAGGTTGTGAAGAATAA
GGTTGCTCCGCCATTCAAGGAAGCTTTCGTAGAAATCATGTATGGCGAAGGAATTTCTAAAACAGGCGAGTTGATTAAAA
TTGCGACAGACCTTGATATTATCAAAAAAGCGGGTGCTTGGTATTCTTATAATGATGAAAAGATTGGTCAAGGGTCTGAA
AATGCTAAGAAATATTTGGCAGATCACCCCGAGATTTTTGAAGAGATTGATCACAAAGTTCGAGTTCACTATGGTTTGAT
CGAGGATGACACTGAAGATGAAAAAGATGCAGAAGCAAATAAAGTAGAGGAAGTCACACTAGATTTGGATGATGCTATTG
AGATTGAGGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis NCTC 12261

89.501

100

0.905
  recA Streptococcus mitis SK321

89.239

100

0.902
  recA Streptococcus pneumoniae D39

88.052

100

0.899
  recA Streptococcus pneumoniae R6

88.052

100

0.899
  recA Streptococcus pneumoniae Rx1

88.052

100

0.899
  recA Streptococcus pneumoniae TIGR4

88.052

100

0.899
  recA Streptococcus mutans UA159

86.162

100

0.875
  recA Streptococcus pyogenes NZ131

86.508

100

0.867
  recA Lactococcus lactis subsp. cremoris KW2

77.874

92.308

0.719
  recA Latilactobacillus sakei subsp. sakei 23K

66.48

94.96

0.631
  recA Bacillus subtilis subsp. subtilis str. 168

69.909

87.268

0.61
  recA Neisseria gonorrhoeae MS11

60.694

91.777

0.557
  recA Neisseria gonorrhoeae MS11

60.694

91.777

0.557
  recA Neisseria gonorrhoeae strain FA1090

60.694

91.777

0.557
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.58

85.942

0.546
  recA Glaesserella parasuis strain SC1401

57.423

94.695

0.544
  recA Vibrio cholerae strain A1552

62.769

86.207

0.541
  recA Vibrio cholerae O1 biovar El Tor strain E7946

62.769

86.207

0.541
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.398

87.268

0.536
  recA Acinetobacter baylyi ADP1

58.213

92.042

0.536
  recA Acinetobacter baumannii D1279779

61.846

86.207

0.533
  recA Pseudomonas stutzeri DSM 10701

56.725

90.716

0.515
  recA Ralstonia pseudosolanacearum GMI1000

60.883

84.085

0.512
  recA Helicobacter pylori strain NCTC11637

58.182

87.533

0.509
  recA Helicobacter pylori 26695

58.182

87.533

0.509
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.704

87.798

0.507

Multiple sequence alignment