Detailed information NTG1008338

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABL312_RS11525
• Genome accession: NZ_CP157793
• Coordinates: 2557036..2558112 (-)
• Length: 358 a.a.
• NCBI ID: WP_349357520.1
• Uniprot ID: -
• Organism: MAG: Stappia sp. isolate ALCB114379_MAG2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2552036..2563112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL312_RS11515 (ABL312_11515)	-	2552365..2553936 (-)	1572	WP_349357518.1	cyclic nucleotide-gated ion channel	-
ABL312_RS11520 (ABL312_11520)	alaS	2553941..2556619 (-)	2679	WP_349357519.1	alanine--tRNA ligase	-
ABL312_RS11525 (ABL312_11525)	recA	2557036..2558112 (-)	1077	WP_349357520.1	recombinase RecA	Machinery gene
ABL312_RS11530 (ABL312_11530)	-	2558444..2559397 (+)	954	WP_349357521.1	PfkB family carbohydrate kinase	-
ABL312_RS11535 (ABL312_11535)	bcmE	2559456..2560883 (-)	1428	WP_349357522.1	thiamine pyridinylase	-
ABL312_RS11540 (ABL312_11540)	-	2561099..2562043 (+)	945	WP_349357523.1	pseudouridine-5'-phosphate glycosidase	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 38321.88 Da
• Isoelectric Point: 4.9463

>NTDB_id=1008338 ABL312_RS11525 WP_349357520.1 2557036..2558112(-) (recA) [MAG: Stappia sp. isolate ALCB114379_MAG2]
MAQNSLRLVEGIQMDKTKALDAALSQIERAFGKGSIMKMGQGQVVEVQTVSTGSLGLDIALGVGGLPRGRIVEIYGPESS
GKTTLALHTVAEAQKTGGICAFIDAEHALDPVYARKLGVNIDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAALT
PKAELEGEMGDSLPGMQARLMSQALRKLTASISRSKCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGA
IKDRDEVVGNQTRVKVVKNKLAPPFRQVEFDIIYGEGVSKMGELLDLGVKGGIVEKSGAWFSYNSQRLGQGRENSKQFLR
ENPEIADEIELAIRQNAGLIADKITDAFSEGDGDGDAE

Nucleotide

• Length: 1077 bp

>NTDB_id=1008338 ABL312_RS11525 WP_349357520.1 2557036..2558112(-) (recA) [MAG: Stappia sp. isolate ALCB114379_MAG2]
ATGGCACAGAATTCACTCCGCTTGGTCGAAGGCATTCAAATGGACAAGACGAAGGCGCTGGACGCCGCCCTTTCGCAAAT
CGAGCGCGCGTTCGGCAAGGGCTCCATCATGAAGATGGGGCAGGGCCAGGTCGTCGAGGTGCAGACGGTGTCCACCGGCT
CGCTCGGTCTCGACATCGCGCTGGGCGTCGGCGGTCTGCCGCGCGGGCGCATCGTGGAGATCTACGGACCGGAATCCTCG
GGCAAGACCACGCTGGCGCTGCACACGGTGGCGGAAGCGCAGAAGACCGGCGGCATCTGCGCCTTCATCGACGCGGAGCA
CGCGCTCGATCCCGTCTATGCGCGCAAGCTCGGCGTCAACATCGACGACCTGCTGATTTCGCAGCCCGATGCCGGCGAGC
AGGCGCTCGAGATCGCCGACACGCTGGTGCGCTCCGGCGCCATTGACGTGCTGGTGGTCGACTCGGTCGCGGCGCTGACG
CCGAAGGCGGAGCTCGAGGGCGAGATGGGCGACAGCCTGCCGGGCATGCAGGCGCGGCTGATGAGCCAGGCGCTGCGCAA
GCTCACCGCCTCGATCTCGCGCTCCAAGTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCG
GCTCGCCCGAGACCACGACCGGCGGCAACGCGCTCAAGTTCTACGCCTCCGTGCGTCTCGACATCCGCCGCATCGGGGCG
ATCAAGGACCGCGACGAGGTCGTTGGCAACCAGACCCGTGTCAAAGTGGTCAAGAACAAGCTGGCCCCGCCGTTCCGCCA
GGTCGAGTTCGACATCATCTACGGCGAGGGCGTGTCGAAGATGGGCGAATTGCTCGATCTCGGCGTCAAGGGCGGGATCG
TCGAGAAGTCCGGCGCCTGGTTCTCCTACAACAGCCAGCGGCTCGGGCAGGGGCGGGAGAACTCCAAGCAGTTCCTGCGC
GAAAACCCCGAGATCGCCGACGAGATCGAGCTGGCCATTCGCCAGAACGCGGGCCTGATCGCCGACAAGATCACCGACGC
CTTCTCCGAGGGCGATGGCGACGGCGACGCCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	75.719	87.43	0.662
recA	Acinetobacter baylyi ADP1	68.421	95.531	0.654
recA	Neisseria gonorrhoeae MS11	71.963	89.665	0.645
recA	Neisseria gonorrhoeae MS11	71.963	89.665	0.645
recA	Neisseria gonorrhoeae strain FA1090	71.963	89.665	0.645
recA	Glaesserella parasuis strain SC1401	71.875	89.385	0.642
recA	Acinetobacter baumannii D1279779	70.405	89.665	0.631
recA	Pseudomonas stutzeri DSM 10701	70.312	89.385	0.628
recA	Vibrio cholerae strain A1552	69.782	89.665	0.626
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.782	89.665	0.626
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.361	91.341	0.606
recA	Bacillus subtilis subsp. subtilis str. 168	66.769	90.782	0.606
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.564	91.061	0.606
recA	Helicobacter pylori strain NCTC11637	63.72	91.62	0.584
recA	Helicobacter pylori 26695	63.415	91.62	0.581
recA	Latilactobacillus sakei subsp. sakei 23K	63.385	90.782	0.575
recA	Streptococcus pneumoniae R6	62.424	92.179	0.575
recA	Streptococcus pneumoniae Rx1	62.424	92.179	0.575
recA	Streptococcus pneumoniae D39	62.424	92.179	0.575
recA	Streptococcus pneumoniae TIGR4	62.424	92.179	0.575
recA	Streptococcus mitis NCTC 12261	62.121	92.179	0.573
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.557	88.268	0.57
recA	Streptococcus mutans UA159	60.714	93.855	0.57
recA	Streptococcus mitis SK321	61.515	92.179	0.567
recA	Lactococcus lactis subsp. cremoris KW2	59.94	92.737	0.556
recA	Streptococcus pyogenes NZ131	60.366	91.62	0.553