Detailed information NTG1007810

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABL838_RS30810
• Genome accession: NZ_CP157624
• Coordinates: 6654359..6655462 (-)
• Length: 367 a.a.
• NCBI ID: WP_184639288.1
• Uniprot ID: -
• Organism: Variovorax sp. 160MFSha2.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6649359..6660462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL838_RS30775 (ABL838_30740)	-	6649526..6650269 (-)	744	WP_184639298.1	hypothetical protein	-
ABL838_RS30780 (ABL838_30745)	yiaA	6650411..6650851 (+)	441	WP_418123394.1	inner membrane protein YiaA	-
ABL838_RS30785 (ABL838_30750)	-	6650858..6651724 (-)	867	WP_418123396.1	IclR family transcriptional regulator	-
ABL838_RS30790 (ABL838_30755)	-	6651735..6652505 (-)	771	WP_126021030.1	SDR family oxidoreductase	-
ABL838_RS30795 (ABL838_30760)	-	6652735..6653406 (+)	672	WP_418118487.1	RraA family protein	-
ABL838_RS30800 (ABL838_30765)	-	6653440..6653874 (-)	435	WP_418118488.1	SRPBCC family protein	-
ABL838_RS30805 (ABL838_30770)	recX	6653852..6654316 (-)	465	WP_418123398.1	recombination regulator RecX	-
ABL838_RS30810 (ABL838_30775)	recA	6654359..6655462 (-)	1104	WP_184639288.1	recombinase RecA	Machinery gene
ABL838_RS30815 (ABL838_30780)	-	6655609..6656094 (+)	486	WP_418118490.1	MarR family winged helix-turn-helix transcriptional regulator	-
ABL838_RS30820 (ABL838_30785)	-	6656167..6656838 (+)	672	WP_126021024.1	response regulator transcription factor	-
ABL838_RS30825 (ABL838_30790)	-	6656894..6658336 (+)	1443	WP_418123399.1	sensor histidine kinase N-terminal domain-containing protein	-
ABL838_RS30830 (ABL838_30795)	-	6658355..6658555 (-)	201	WP_126021022.1	sporulation protein	-
ABL838_RS30835 (ABL838_30800)	-	6658564..6659382 (-)	819	WP_418123401.1	biotin--[acetyl-CoA-carboxylase] ligase	-
ABL838_RS30840 (ABL838_30805)	-	6659386..6660096 (-)	711	WP_418123402.1	SET domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 39071.78 Da
• Isoelectric Point: 5.2156

>NTDB_id=1007810 ABL838_RS30810 WP_184639288.1 6654359..6655462(-) (recA) [Variovorax sp. 160MFSha2.1]
MDAAVKGSNIGANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPES
SGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAAL
TPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
TIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIIDKSGAWYAYNGEKIGQGRDNAREFL
RENPSLSREIENKVRESLGVPLLAADADDVAEKPQKAAKADKAEKGE

Nucleotide

• Length: 1104 bp

>NTDB_id=1007810 ABL838_RS30810 WP_184639288.1 6654359..6655462(-) (recA) [Variovorax sp. 160MFSha2.1]
ATGGACGCAGCAGTCAAGGGTTCGAACATCGGCGCCAACAGCGAGAAGGCCAAAGCCCTGCAGGCCGCGCTGGCCCAGAT
CGAAAAGCAGTTCGGCAAGGGCACCATCATGCGGCTGGGCGAGGGCGAGGCGCTGGAGGACATCCAGGTGGTCTCTACCG
GCTCGCTGGGCCTGGACATCGCCCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTCGTCGAAATCTACGGCCCTGAATCC
TCGGGCAAGACCACCCTCACGCTGCAGGTCATCGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGCCGA
ACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTGAACCTGTCGGACCTGCTGATCAGCCAGCCCGACACCGGCG
AGCAGGCGCTCGAGATCGTCGATTCGCTGGTGCGCTCGGGCGCCGTCGACCTGATCGTGGTCGACTCGGTCGCCGCGCTC
ACGCCCAAGGCCGAAATCGAAGGCGAGATGGGCGACTCGCTGCCCGGCCTTCAGGCCCGCCTGATGAGCCAGGCGCTGCG
CAAGCTCACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGCTCGCCCGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGC
ACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCTCCGTTCAA
GACGGCCGAGTTCGACATCCTGTTCGGCGAAGGCATCAGCCGCGAGGGCGAGATCATCGACATGGGCGTGAACGCCAAGA
TCATCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTCCTG
CGCGAGAACCCCTCGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCGTGCCGCTGCTGGCCGCCGATGC
CGACGACGTCGCCGAGAAGCCGCAGAAGGCGGCCAAGGCCGACAAGGCAGAGAAGGGCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	82.759	86.921	0.719
recA	Pseudomonas stutzeri DSM 10701	70.882	92.643	0.657
recA	Neisseria gonorrhoeae MS11	71.818	89.918	0.646
recA	Neisseria gonorrhoeae strain FA1090	71.818	89.918	0.646
recA	Neisseria gonorrhoeae MS11	71.818	89.918	0.646
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.406	94.005	0.643
recA	Vibrio cholerae strain A1552	68.406	94.005	0.643
recA	Acinetobacter baylyi ADP1	72.086	88.828	0.64
recA	Glaesserella parasuis strain SC1401	71.914	88.283	0.635
recA	Acinetobacter baumannii D1279779	70.859	88.828	0.629
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.015	93.46	0.608
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.767	90.191	0.602
recA	Helicobacter pylori 26695	64.939	89.373	0.58
recA	Helicobacter pylori strain NCTC11637	64.939	89.373	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	89.101	0.575
recA	Streptococcus mitis NCTC 12261	58.924	96.185	0.567
recA	Latilactobacillus sakei subsp. sakei 23K	62.918	89.646	0.564
recA	Lactococcus lactis subsp. cremoris KW2	61.934	90.191	0.559
recA	Streptococcus pneumoniae D39	59.593	93.733	0.559
recA	Streptococcus pneumoniae TIGR4	59.593	93.733	0.559
recA	Streptococcus pneumoniae R6	59.593	93.733	0.559
recA	Streptococcus pneumoniae Rx1	59.593	93.733	0.559
recA	Streptococcus mutans UA159	62.121	89.918	0.559
recA	Streptococcus pyogenes NZ131	62.006	89.646	0.556
recA	Streptococcus mitis SK321	60.725	90.191	0.548
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	87.466	0.537