Detailed information NTG1007773

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABL843_RS30745
• Genome accession: NZ_CP157620
• Coordinates: 6733111..6734214 (-)
• Length: 367 a.a.
• NCBI ID: WP_418118489.1
• Uniprot ID: -
• Organism: Variovorax sp. 350MFTsu5.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 6728111..6739214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL843_RS30710 (ABL843_30705)	-	6728276..6729019 (-)	744	WP_418118485.1	hypothetical protein	-
ABL843_RS30715 (ABL843_30710)	yiaA	6729161..6729601 (+)	441	WP_184639296.1	inner membrane protein YiaA	-
ABL843_RS30720 (ABL843_30715)	-	6729608..6730474 (-)	867	WP_184639294.1	IclR family transcriptional regulator	-
ABL843_RS30725 (ABL843_30720)	-	6730485..6731255 (-)	771	WP_418118486.1	SDR family oxidoreductase	-
ABL843_RS30730 (ABL843_30725)	-	6731485..6732156 (+)	672	WP_418118487.1	RraA family protein	-
ABL843_RS30735 (ABL843_30730)	-	6732190..6732624 (-)	435	WP_418118488.1	SRPBCC family protein	-
ABL843_RS30740 (ABL843_30735)	recX	6732602..6733066 (-)	465	WP_126021027.1	recombination regulator RecX	-
ABL843_RS30745 (ABL843_30740)	recA	6733111..6734214 (-)	1104	WP_418118489.1	recombinase RecA	Machinery gene
ABL843_RS30750 (ABL843_30745)	-	6734361..6734846 (+)	486	WP_418118490.1	MarR family winged helix-turn-helix transcriptional regulator	-
ABL843_RS30755 (ABL843_30750)	-	6734919..6735590 (+)	672	WP_126021024.1	response regulator transcription factor	-
ABL843_RS30760 (ABL843_30755)	-	6735646..6737088 (+)	1443	WP_418118491.1	sensor histidine kinase N-terminal domain-containing protein	-
ABL843_RS30765 (ABL843_30760)	-	6737107..6737307 (-)	201	WP_126021022.1	sporulation protein	-
ABL843_RS30770 (ABL843_30765)	-	6737316..6738134 (-)	819	WP_418118492.1	biotin--[acetyl-CoA-carboxylase] ligase	-
ABL843_RS30775 (ABL843_30770)	-	6738137..6738835 (-)	699	WP_375792091.1	SET domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 39112.84 Da
• Isoelectric Point: 5.2119

>NTDB_id=1007773 ABL843_RS30745 WP_418118489.1 6733111..6734214(-) (recA) [Variovorax sp. 350MFTsu5.1]
MDAAVKGSNIGANNEKAKALQAALAQIEKQFGKGTIMRLGEGEVLEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPES
SGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAAL
TPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
TIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIIDKSGAWYAYNGEKIGQGRDNAREFL
RENPSLSREIENKVRESLGVPLLAADADDVAEKPQKAAKADKADKGE

Nucleotide

• Length: 1104 bp

>NTDB_id=1007773 ABL843_RS30745 WP_418118489.1 6733111..6734214(-) (recA) [Variovorax sp. 350MFTsu5.1]
ATGGACGCAGCAGTCAAGGGTTCGAACATCGGCGCCAACAACGAGAAGGCCAAGGCCCTGCAGGCCGCGCTGGCCCAGAT
CGAAAAGCAGTTCGGCAAGGGCACCATCATGCGGCTGGGTGAGGGCGAGGTGCTGGAAGACATCCAGGTGGTCTCCACCG
GCTCGCTGGGCCTGGACATCGCCCTGGGCGTCGGCGGCCTGCCGCGCGGCCGGGTGGTCGAAATCTACGGCCCTGAATCC
TCGGGCAAGACCACGCTCACGCTGCAGGTCATCGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGCCGA
ACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTGAACCTGTCGGACCTGCTGATCAGCCAGCCCGACACCGGCG
AGCAGGCGCTCGAGATCGTCGATTCGCTGGTGCGCTCGGGCGCCGTCGACCTGATCGTGGTCGACTCGGTCGCCGCGCTC
ACGCCCAAGGCCGAAATCGAAGGCGAGATGGGCGACTCGCTGCCCGGCCTTCAGGCCCGCCTGATGAGCCAGGCGCTGCG
CAAGCTCACGGCCACGATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTCATGT
TCGGCTCGCCCGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGC
ACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCTCCGTTCAA
GACGGCCGAGTTCGACATCCTGTTCGGCGAGGGCATCAGCCGCGAGGGCGAGATCATCGACATGGGCGTGAACGCCAAGA
TCATCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTCCTG
CGCGAGAACCCCTCGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCGTGCCGCTGCTGGCCGCCGATGC
CGACGACGTCGCCGAGAAGCCGCAGAAGGCGGCCAAGGCCGACAAGGCAGATAAGGGCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.072	86.921	0.722
recA	Pseudomonas stutzeri DSM 10701	70.882	92.643	0.657
recA	Neisseria gonorrhoeae MS11	71.818	89.918	0.646
recA	Neisseria gonorrhoeae MS11	71.818	89.918	0.646
recA	Neisseria gonorrhoeae strain FA1090	71.818	89.918	0.646
recA	Acinetobacter baylyi ADP1	72.393	88.828	0.643
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.713	93.188	0.64
recA	Vibrio cholerae strain A1552	68.713	93.188	0.64
recA	Glaesserella parasuis strain SC1401	71.914	88.283	0.635
recA	Acinetobacter baumannii D1279779	71.827	88.011	0.632
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.306	93.46	0.61
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	67.069	90.191	0.605
recA	Helicobacter pylori 26695	65.244	89.373	0.583
recA	Helicobacter pylori strain NCTC11637	65.244	89.373	0.583
recA	Streptococcus mutans UA159	58.989	97.003	0.572
recA	Bacillus subtilis subsp. subtilis str. 168	64.22	89.101	0.572
recA	Latilactobacillus sakei subsp. sakei 23K	63.222	89.646	0.567
recA	Streptococcus mitis NCTC 12261	58.146	97.003	0.564
recA	Lactococcus lactis subsp. cremoris KW2	61.818	89.918	0.556
recA	Streptococcus pneumoniae D39	59.475	93.46	0.556
recA	Streptococcus pneumoniae Rx1	59.475	93.46	0.556
recA	Streptococcus pneumoniae R6	59.475	93.46	0.556
recA	Streptococcus pneumoniae TIGR4	59.475	93.46	0.556
recA	Streptococcus pyogenes NZ131	61.515	89.918	0.553
recA	Streptococcus mitis SK321	60.606	89.918	0.545
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	87.466	0.537