Detailed information NTG1007675

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABL848_RS10325
• Genome accession: NZ_CP157611
• Coordinates: 2193787..2194881 (-)
• Length: 364 a.a.
• NCBI ID: WP_093195926.1
• Uniprot ID: A0A1H7J001
• Organism: Variovorax sp. NFACC28
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2188787..2199881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABL848_RS10290 (ABL848_10285)	-	2188809..2189492 (+)	684	WP_093300199.1	amino acid ABC transporter permease	-
ABL848_RS10295 (ABL848_10290)	-	2189515..2190162 (+)	648	WP_093300566.1	amino acid ABC transporter permease	-
ABL848_RS10300 (ABL848_10295)	-	2190146..2190874 (+)	729	WP_093195931.1	amino acid ABC transporter ATP-binding protein	-
ABL848_RS10305 (ABL848_10300)	-	2190907..2191734 (+)	828	WP_093300201.1	transporter substrate-binding domain-containing protein	-
ABL848_RS10310 (ABL848_10305)	-	2191740..2192849 (+)	1110	WP_093300205.1	mandelate racemase/muconate lactonizing enzyme family protein	-
ABL848_RS10315 (ABL848_10310)	-	2192874..2193302 (-)	429	WP_093300207.1	polyketide cyclase	-
ABL848_RS10320 (ABL848_10315)	recX	2193286..2193744 (-)	459	WP_093300208.1	recombination regulator RecX	-
ABL848_RS10325 (ABL848_10320)	recA	2193787..2194881 (-)	1095	WP_093195926.1	recombinase RecA	Machinery gene
ABL848_RS10330 (ABL848_10325)	-	2195028..2195513 (+)	486	WP_093300209.1	MarR family winged helix-turn-helix transcriptional regulator	-
ABL848_RS10335 (ABL848_10330)	-	2195587..2196261 (+)	675	WP_093300210.1	response regulator transcription factor	-
ABL848_RS10340 (ABL848_10335)	-	2196374..2197816 (+)	1443	WP_093300211.1	sensor histidine kinase	-
ABL848_RS10345 (ABL848_10340)	-	2197845..2198045 (-)	201	WP_093300212.1	sporulation protein	-
ABL848_RS10350 (ABL848_10345)	-	2198050..2198868 (-)	819	WP_093300213.1	biotin--[acetyl-CoA-carboxylase] ligase	-
ABL848_RS10355 (ABL848_10350)	-	2198871..2199581 (-)	711	WP_418116148.1	SET domain-containing protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 38814.53 Da
• Isoelectric Point: 5.2049

>NTDB_id=1007675 ABL848_RS10325 WP_093195926.1 2193787..2194881(-) (recA) [Variovorax sp. NFACC28]
MDAVVKGSSIGANSEKAKALQAALAQIEKQFGKGTIMRLGEGEVLEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPES
SGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAAL
TPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIG
TIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNAKIIDKSGAWYAYNGEKIGQGRDNAREFL
RENPTLSREIENKVRESLGVPLLAADADDTPEKPQKAAKADKGE

Nucleotide

• Length: 1095 bp

>NTDB_id=1007675 ABL848_RS10325 WP_093195926.1 2193787..2194881(-) (recA) [Variovorax sp. NFACC28]
ATGGACGCAGTCGTCAAAGGTTCGAGCATCGGTGCCAACAGCGAAAAGGCCAAGGCCCTGCAGGCCGCGCTGGCCCAGAT
CGAGAAGCAGTTCGGCAAGGGCACCATCATGCGGCTCGGCGAGGGCGAGGTGCTGGAGGACATCCAGGTGGTCTCCACCG
GCTCGCTGGGCCTGGACATCGCCCTGGGCGTCGGCGGCCTGCCGCGCGGCCGGGTGGTCGAGATCTACGGCCCTGAATCG
TCGGGCAAGACCACGCTCACGCTGCAGGTCATCGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGCCGA
ACACGCCCTCGACGTGCAGTACGCCCAGAAGCTCGGCGTGAACCTGTCGGACCTGCTGATCAGCCAGCCCGACACCGGTG
AGCAGGCCCTCGAGATCGTCGACTCGCTGGTGCGCTCCGGCGCCGTCGACCTGATCGTGGTCGACTCGGTCGCCGCGCTC
ACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTGCG
CAAGCTGACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGT
TCGGCTCGCCCGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGC
ACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAGACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCTCCGTTCAA
GACGGCCGAGTTCGACATCCTGTTCGGCGAGGGCATCAGCCGCGAGGGCGAGATCATCGACATGGGCGTGAACGCCAAGA
TCATCGACAAGTCGGGTGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTCCTG
CGCGAGAACCCCACGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCGTGCCGCTGCTGGCCGCCGATGC
CGACGACACGCCCGAGAAGCCGCAGAAGGCGGCCAAGGCCGACAAGGGCGAGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (18-280)

3D structure

• AlphaFold DB: A0A1H7J001

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	83.072	87.637	0.728
recA	Acinetobacter baylyi ADP1	70.058	94.505	0.662
recA	Neisseria gonorrhoeae MS11	69.452	95.33	0.662
recA	Neisseria gonorrhoeae strain FA1090	69.452	95.33	0.662
recA	Neisseria gonorrhoeae MS11	69.452	95.33	0.662
recA	Pseudomonas stutzeri DSM 10701	70.796	93.132	0.659
recA	Glaesserella parasuis strain SC1401	69.912	93.132	0.651
recA	Acinetobacter baumannii D1279779	71.166	89.56	0.637
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.605	90.385	0.629
recA	Vibrio cholerae strain A1552	69.605	90.385	0.629
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.306	94.231	0.615
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.588	93.407	0.613
recA	Helicobacter pylori strain NCTC11637	65.244	90.11	0.588
recA	Helicobacter pylori 26695	65.244	90.11	0.588
recA	Latilactobacillus sakei subsp. sakei 23K	61.696	93.956	0.58
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	89.835	0.58
recA	Streptococcus mutans UA159	60.641	94.231	0.571
recA	Streptococcus pneumoniae D39	58.12	96.429	0.56
recA	Streptococcus pneumoniae TIGR4	58.12	96.429	0.56
recA	Streptococcus pneumoniae Rx1	58.12	96.429	0.56
recA	Streptococcus pneumoniae R6	58.12	96.429	0.56
recA	Lactococcus lactis subsp. cremoris KW2	61.631	90.934	0.56
recA	Streptococcus pyogenes NZ131	61.702	90.385	0.558
recA	Streptococcus mitis SK321	60.423	90.934	0.549
recA	Streptococcus mitis NCTC 12261	60.423	90.934	0.549
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.371	88.187	0.541