Detailed information NTG1006533

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABDM36_RS11600
• Genome accession: NZ_CP157384
• Coordinates: 2559697..2560761 (-)
• Length: 354 a.a.
• NCBI ID: WP_000344154.1
• Uniprot ID: A0A0K9UMZ1
• Organism: Vibrio cholerae C6706
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2554697..2565761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDM36_RS11585	-	2554960..2556147 (-)	1188	WP_001883372.1	aspartate kinase	-
ABDM36_RS11590	alaS	2556351..2558933 (-)	2583	WP_000481017.1	alanine--tRNA ligase	-
ABDM36_RS11595	recX	2559106..2559564 (-)	459	WP_000006855.1	recombination regulator RecX	-
ABDM36_RS11600	recA	2559697..2560761 (-)	1065	WP_000344154.1	recombinase RecA	Machinery gene
ABDM36_RS11605	pncC	2560895..2561401 (-)	507	WP_000853811.1	nicotinamide-nucleotide amidase	-
ABDM36_RS11610	-	2561568..2562698 (-)	1131	WP_000027776.1	sulfate/molybdate ABC transporter ATP-binding protein	-
ABDM36_RS11615	cysW	2562695..2563558 (-)	864	WP_000951362.1	sulfate ABC transporter permease subunit CysW	-
ABDM36_RS11620	cysT	2563569..2564420 (-)	852	WP_000531810.1	sulfate/thiosulfate ABC transporter permease CysT	-
ABDM36_RS11625	cysP	2564497..2565498 (-)	1002	WP_001079835.1	thiosulfate ABC transporter substrate-binding protein CysP	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38249.92 Da
• Isoelectric Point: 5.0766

>NTDB_id=1006533 ABDM36_RS11600 WP_000344154.1 2559697..2560761(-) (recA) [Vibrio cholerae C6706]
MDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIA
AAQREGKTCAFIDAEHALDPVYAKKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNE
TRIKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSYNGDKIGQGKANACKYLKENPEIAKTLDK
KLREMLLNPENMQLIAETSSAADDVEFGAVPEEF

Nucleotide

• Length: 1065 bp

>NTDB_id=1006533 ABDM36_RS11600 WP_000344154.1 2559697..2560761(-) (recA) [Vibrio cholerae C6706]
ATGGACGAGAATAAACAGAAGGCACTTGCGGCCGCCCTCGGTCAAATTGAAAAGCAATTTGGTAAAGGCTCCATCATGCG
CTTAGGCGACAACCGCGCGATGGATGTAGAAACCATTTCGACCGGTTCTCTGTCTCTGGATATCGCGTTGGGTGCTGGTG
GTCTACCAATGGGACGTATCGTTGAGATCTTCGGCCCTGAATCTTCGGGTAAAACGACACTGACTCTGGAACTGATTGCT
GCTGCACAACGTGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCACTGGATCCGGTTTATGCCAAAAAATTGGG
CGTGAATATCGATGAGCTACTGGTTTCTCAGCCAGATACCGGCGAGCAAGCACTGGAAATTTGTGATGCACTGGCTCGCT
CTGGTGCTGTGGATGTCATCGTTGTTGACTCAGTAGCGGCTTTGACACCAAAAGCGGAAATTGAAGGCGAAATGGGCGAT
AGCCACATGGGTCTGCAAGCGCGTATGTTGTCGCAAGCAATGCGTAAACTGACGGGTAACCTCAAGCAATCCAACTGTAT
GTGTATCTTCATCAACCAAATTCGTATGAAGATTGGTGTGATGTTTGGTAACCCAGAAACTACCACTGGCGGTAACGCAC
TGAAATTCTACGCTTCTGTTCGTTTGGATATTCGCCGTACTGGCGCAATCAAAGAAGGCGAAGAAGTGGTGGGTAACGAA
ACCCGTATCAAGGTTGTGAAGAACAAGATTGCTGCGCCGTTTAAAGAAGCGAACACTCAGATCATGTATGGCCAAGGTTT
CAATCGTGAAGGTGAATTGATCGATCTTGGTGTGAAACACAAAATGGTTGAGAAGTCAGGCGCTTGGTACAGCTATAACG
GCGATAAAATCGGCCAAGGTAAAGCGAATGCCTGCAAGTATCTGAAAGAAAACCCAGAAATTGCGAAAACTCTAGATAAA
AAACTGCGTGAAATGCTGTTAAACCCAGAAAACATGCAGCTGATCGCTGAAACATCTTCTGCGGCGGATGACGTCGAATT
TGGCGCGGTGCCAGAAGAGTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: A0A0K9UMZ1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	100	100	1
recA	Vibrio cholerae O1 biovar El Tor strain E7946	100	100	1
recA	Pseudomonas stutzeri DSM 10701	75.841	92.373	0.701
recA	Acinetobacter baylyi ADP1	70.69	98.305	0.695
recA	Glaesserella parasuis strain SC1401	69.516	99.153	0.689
recA	Acinetobacter baumannii D1279779	73.7	92.373	0.681
recA	Neisseria gonorrhoeae MS11	66.949	100	0.669
recA	Neisseria gonorrhoeae MS11	66.949	100	0.669
recA	Neisseria gonorrhoeae strain FA1090	66.949	100	0.669
recA	Ralstonia pseudosolanacearum GMI1000	69.659	91.243	0.636
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.506	91.525	0.59
recA	Helicobacter pylori strain NCTC11637	61.31	94.915	0.582
recA	Helicobacter pylori 26695	61.012	94.915	0.579
recA	Bacillus subtilis subsp. subtilis str. 168	63.863	90.678	0.579
recA	Streptococcus pneumoniae D39	62.848	91.243	0.573
recA	Streptococcus pneumoniae Rx1	62.848	91.243	0.573
recA	Streptococcus pneumoniae R6	62.848	91.243	0.573
recA	Streptococcus pneumoniae TIGR4	62.848	91.243	0.573
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.027	93.503	0.571
recA	Streptococcus mitis NCTC 12261	62.229	91.243	0.568
recA	Streptococcus mitis SK321	61.92	91.243	0.565
recA	Streptococcus mutans UA159	61.231	91.808	0.562
recA	Lactococcus lactis subsp. cremoris KW2	60.991	91.243	0.556
recA	Streptococcus pyogenes NZ131	60.615	91.808	0.556
recA	Latilactobacillus sakei subsp. sakei 23K	60.748	90.678	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	62.3	88.418	0.551