Detailed information NTG1003830

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABH008_RS05825
• Genome accession: NZ_CP157005
• Coordinates: 1289659..1290711 (+)
• Length: 350 a.a.
• NCBI ID: WP_347988914.1
• Uniprot ID: -
• Organism: Methylomonas sp. AM2-LC
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1284659..1295711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH008_RS05815	-	1286969..1288681 (-)	1713	WP_347988912.1	glycosyl hydrolase family 17 protein	-
ABH008_RS05820	-	1288766..1289479 (+)	714	WP_347988913.1	TatD family hydrolase	-
ABH008_RS05825	recA	1289659..1290711 (+)	1053	WP_347988914.1	recombinase RecA	Machinery gene
ABH008_RS05830	-	1290680..1291168 (+)	489	WP_347988915.1	regulatory protein RecX	-
ABH008_RS05835	alaS	1291272..1293881 (+)	2610	WP_347989950.1	alanine--tRNA ligase	-
ABH008_RS05840	-	1293963..1295180 (+)	1218	WP_347988916.1	aspartate kinase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37716.14 Da
• Isoelectric Point: 5.3100

>NTDB_id=1003830 ABH008_RS05825 WP_347988914.1 1289659..1290711(+) (recA) [Methylomonas sp. AM2-LC]
MDDNKKKALGAALMQIEKQFGKGSVMRMGDAAAMRDIDVVSTGSLGLDIALGCGGLPRGRVVEIFGPESSGKTTLTLQTI
AQMQKLGGTAAFVDAEHALDPEYAQKIGVNIGDLLVSQPDTGEQALEITDMLVRSGAVDIVVIDSVAALTPKAEIEGDMG
DSHMGLQARLMSQALRKLTANIKRSNTLVIFINQLRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGSIKKGDEVIGN
ETRVKVVKNKVAPPFKQADFEILYGEGVSFLGELVDLGVEHGFVQKSGSWYSYNNEKIGQGKDNAKQFLRDNPDKAIVLE
KAIREKAFASRHTAPLAIIEDDDSEFADGD

Nucleotide

• Length: 1053 bp

>NTDB_id=1003830 ABH008_RS05825 WP_347988914.1 1289659..1290711(+) (recA) [Methylomonas sp. AM2-LC]
ATGGACGACAACAAGAAAAAGGCGCTAGGCGCCGCTTTGATGCAGATTGAAAAGCAGTTTGGCAAGGGTTCCGTTATGCG
TATGGGTGATGCAGCCGCCATGCGTGATATCGATGTAGTGTCCACGGGTTCTTTAGGGCTTGATATCGCTCTGGGTTGTG
GTGGTTTACCGCGTGGGCGAGTTGTTGAAATTTTCGGACCAGAGTCTTCTGGTAAAACCACGTTGACTTTACAAACCATT
GCCCAAATGCAAAAGCTGGGTGGTACGGCAGCATTTGTCGATGCTGAACATGCCCTGGATCCAGAATATGCCCAAAAAAT
CGGTGTTAATATTGGTGATTTATTAGTCTCGCAACCCGATACGGGGGAGCAGGCTTTAGAAATTACTGACATGCTGGTGC
GCTCCGGCGCTGTAGATATCGTAGTTATCGATTCAGTAGCTGCTTTAACCCCAAAAGCTGAGATCGAAGGTGACATGGGC
GATTCGCACATGGGGCTGCAAGCCCGGTTAATGTCGCAGGCTTTGCGTAAATTAACAGCGAATATCAAACGTTCCAATAC
GCTGGTGATTTTTATCAACCAATTACGTATGAAAATTGGAGTCATGTTTGGTAATCCAGAAACAACGACGGGTGGTAATG
CCTTAAAATTTTATGCATCGGTACGACTAGATATTCGTCGTATTGGATCGATTAAGAAAGGTGATGAAGTTATTGGTAAC
GAGACTCGGGTTAAAGTTGTCAAAAACAAAGTTGCACCACCGTTTAAACAGGCCGATTTTGAGATTCTGTATGGAGAAGG
CGTGTCTTTCTTGGGAGAATTGGTCGATTTAGGTGTTGAGCATGGTTTTGTGCAAAAATCTGGTTCCTGGTATAGCTACA
ATAATGAGAAAATTGGCCAGGGTAAAGATAATGCCAAACAGTTTTTACGGGATAACCCAGACAAAGCTATCGTTTTGGAA
AAAGCTATTCGGGAAAAAGCCTTTGCTTCTCGACATACAGCACCGTTGGCAATAATCGAAGATGATGACAGCGAGTTTGC
AGACGGCGATTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	70.085	100	0.703
recA	Ralstonia pseudosolanacearum GMI1000	73.353	95.429	0.7
recA	Acinetobacter baylyi ADP1	72.619	96	0.697
recA	Vibrio cholerae strain A1552	69.828	99.429	0.694
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.828	99.429	0.694
recA	Acinetobacter baumannii D1279779	68.497	98.857	0.677
recA	Glaesserella parasuis strain SC1401	68.208	98.857	0.674
recA	Neisseria gonorrhoeae strain FA1090	71.296	92.571	0.66
recA	Neisseria gonorrhoeae MS11	71.296	92.571	0.66
recA	Neisseria gonorrhoeae MS11	71.296	92.571	0.66
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	66.667	94.286	0.629
recA	Bacillus subtilis subsp. subtilis str. 168	66.46	92	0.611
recA	Streptococcus pyogenes NZ131	58.402	100	0.606
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.308	92.857	0.597
recA	Streptococcus mutans UA159	65.19	90.286	0.589
recA	Latilactobacillus sakei subsp. sakei 23K	62.5	93.714	0.586
recA	Helicobacter pylori 26695	59.644	96.286	0.574
recA	Streptococcus pneumoniae Rx1	61.656	93.143	0.574
recA	Streptococcus pneumoniae D39	61.656	93.143	0.574
recA	Streptococcus pneumoniae R6	61.656	93.143	0.574
recA	Streptococcus pneumoniae TIGR4	61.656	93.143	0.574
recA	Helicobacter pylori strain NCTC11637	59.347	96.286	0.571
recA	Streptococcus mitis SK321	63.376	89.714	0.569
recA	Streptococcus mitis NCTC 12261	63.376	89.714	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.245	93.429	0.563
recA	Lactococcus lactis subsp. cremoris KW2	62.102	89.714	0.557