Detailed information NTG1001684

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: V5734_RS11185
• Genome accession: NZ_CP156081
• Coordinates: 2104874..2105947 (+)
• Length: 357 a.a.
• NCBI ID: WP_347309746.1
• Uniprot ID: -
• Organism: Defluviimonas sp. SAOS-178_SWC
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2099874..2110947

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V5734_RS11170 (V5734_11170)	-	2100350..2101534 (+)	1185	WP_347309743.1	RsmB/NOP family class I SAM-dependent RNA methyltransferase	-
V5734_RS11175 (V5734_11175)	-	2101639..2103948 (+)	2310	WP_347309744.1	ATP-binding protein	-
V5734_RS11180 (V5734_11180)	-	2104087..2104680 (-)	594	WP_347309745.1	hypothetical protein	-
V5734_RS11185 (V5734_11185)	recA	2104874..2105947 (+)	1074	WP_347309746.1	recombinase RecA	Machinery gene
V5734_RS11190 (V5734_11190)	alaS	2106174..2108840 (+)	2667	WP_347309747.1	alanine--tRNA ligase	-
V5734_RS11195 (V5734_11195)	-	2108837..2109133 (+)	297	WP_347309748.1	DUF1330 domain-containing protein	-
V5734_RS11200 (V5734_11200)	-	2109220..2110011 (+)	792	WP_347309749.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38232.53 Da
• Isoelectric Point: 5.0532

>NTDB_id=1001684 V5734_RS11185 WP_347309746.1 2104874..2105947(+) (recA) [Defluviimonas sp. SAOS-178_SWC]
MAVTNLLDMNDKRSADKQKALDSALAQIERQFGKGSIMKLGADNPVMEIEATSTGSLGLDIALGIGGLPKGRVVEIYGPE
SSGKTTLTLHVVAEEQKKGGVCAFVDAEHALDPQYAKKLGVNLDELLISQPDTGEQALEIVDTLVRSGAVSLVVVDSVAA
LVPKSELEGDMGDSSVGVHARLMSQAMRKLTSSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
GSIKDRDEVVGNTTRVKVVKNKVSPPFKQVEFDIMYGEGISKTGELIDLGVKAGVVEKSGAWYSYGDERIGQGRENAKQF
LKDNPDFAHAIEDKIRASHGLDFGASDDGPGDDVMEA

Nucleotide

• Length: 1074 bp

>NTDB_id=1001684 V5734_RS11185 WP_347309746.1 2104874..2105947(+) (recA) [Defluviimonas sp. SAOS-178_SWC]
ATGGCAGTGACGAACCTTCTCGACATGAACGACAAGCGCTCCGCGGACAAACAGAAAGCGCTCGACAGCGCGCTCGCCCA
GATCGAACGGCAGTTCGGCAAGGGTTCCATCATGAAGCTCGGCGCCGACAATCCGGTGATGGAGATCGAGGCGACCTCGA
CCGGCTCGCTCGGGCTCGATATCGCGCTCGGCATCGGCGGATTGCCGAAGGGCCGGGTGGTCGAGATCTACGGGCCGGAA
AGCTCTGGCAAGACGACGCTGACGCTCCATGTCGTGGCCGAAGAGCAGAAGAAGGGCGGCGTCTGCGCCTTCGTCGACGC
CGAGCACGCGCTCGACCCGCAATATGCCAAGAAGCTCGGCGTCAACCTCGACGAGCTTCTGATCTCGCAGCCCGATACCG
GCGAGCAGGCGCTGGAGATCGTTGACACGCTGGTGCGGTCCGGCGCGGTCAGCCTTGTCGTCGTCGACTCGGTCGCGGCG
CTCGTGCCGAAGTCCGAGCTTGAGGGCGACATGGGCGATTCCAGCGTCGGTGTGCATGCCCGCCTGATGAGCCAGGCGAT
GCGGAAGCTGACGAGCTCCATCAGCCGCTCGAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGA
TGTTCGGTTCGCCCGAGACGACGACGGGCGGCAACGCGCTCAAGTTCTACGCGTCCGTCCGGCTCGATATCCGCCGCATC
GGCTCGATCAAGGATCGCGACGAGGTGGTCGGCAACACCACCCGCGTAAAGGTCGTGAAGAACAAGGTGTCGCCACCCTT
CAAGCAGGTCGAGTTCGACATCATGTACGGCGAGGGGATCTCCAAGACCGGCGAGTTGATCGACCTTGGCGTGAAGGCCG
GGGTCGTGGAAAAGTCCGGCGCCTGGTATTCCTACGGGGATGAGCGCATCGGCCAGGGGCGCGAGAACGCCAAGCAGTTC
CTCAAGGACAATCCCGATTTCGCCCACGCCATCGAGGACAAGATCCGCGCCAGCCACGGGCTCGATTTCGGGGCCTCGGA
TGACGGTCCGGGCGACGACGTCATGGAGGCCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (19-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	74.085	91.877	0.681
recA	Neisseria gonorrhoeae MS11	67.93	96.078	0.653
recA	Neisseria gonorrhoeae strain FA1090	67.93	96.078	0.653
recA	Neisseria gonorrhoeae MS11	67.93	96.078	0.653
recA	Glaesserella parasuis strain SC1401	66.474	96.919	0.644
recA	Pseudomonas stutzeri DSM 10701	70.497	90.196	0.636
recA	Acinetobacter baylyi ADP1	66.276	95.518	0.633
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.405	89.916	0.633
recA	Vibrio cholerae strain A1552	70.405	89.916	0.633
recA	Acinetobacter baumannii D1279779	68.536	89.916	0.616
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.516	95.518	0.616
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.223	95.518	0.613
recA	Bacillus subtilis subsp. subtilis str. 168	66.768	91.877	0.613
recA	Helicobacter pylori strain NCTC11637	65.644	91.317	0.599
recA	Helicobacter pylori 26695	65.644	91.317	0.599
recA	Lactococcus lactis subsp. cremoris KW2	61.047	96.359	0.588
recA	Streptococcus mitis SK321	60.704	95.518	0.58
recA	Streptococcus mitis NCTC 12261	60.882	95.238	0.58
recA	Streptococcus pneumoniae R6	60.588	95.238	0.577
recA	Streptococcus pneumoniae TIGR4	60.588	95.238	0.577
recA	Streptococcus pneumoniae Rx1	60.588	95.238	0.577
recA	Streptococcus pneumoniae D39	60.588	95.238	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	60	93.838	0.563
recA	Streptococcus mutans UA159	60.909	92.437	0.563
recA	Streptococcus pyogenes NZ131	59.05	94.398	0.557
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.951	90.756	0.535