Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WHQ41_RS04625 | Genome accession | NZ_CP148215 |
| Coordinates | 880922..881224 (-) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain Z1323CCJ0058 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 875922..886224
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHQ41_RS04590 (WHQ41_04590) | - | 876335..877096 (+) | 762 | WP_002867190.1 | ATP-binding protein | - |
| WHQ41_RS04595 (WHQ41_04595) | - | 877093..877779 (+) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WHQ41_RS04600 (WHQ41_04600) | thiD | 877776..878588 (+) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WHQ41_RS04605 (WHQ41_04605) | thiE | 878578..879210 (+) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WHQ41_RS04610 (WHQ41_04610) | hemD | 879188..879817 (+) | 630 | WP_234729001.1 | uroporphyrinogen-III synthase | - |
| WHQ41_RS04615 (WHQ41_04615) | - | 879814..880266 (-) | 453 | WP_002859148.1 | hypothetical protein | - |
| WHQ41_RS04620 (WHQ41_04620) | - | 880263..880925 (-) | 663 | WP_146263321.1 | hypothetical protein | - |
| WHQ41_RS04625 (WHQ41_04625) | ctsT | 880922..881224 (-) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WHQ41_RS04630 (WHQ41_04630) | proC | 881221..881952 (-) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WHQ41_RS04635 (WHQ41_04635) | fliW | 881952..882341 (-) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WHQ41_RS04640 (WHQ41_04640) | - | 882502..883149 (+) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| WHQ41_RS04645 (WHQ41_04645) | lon | 883166..885541 (+) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WHQ41_RS04650 (WHQ41_04650) | rpsR | 885601..885861 (-) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=952836 WHQ41_RS04625 WP_002853046.1 880922..881224(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0058]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=952836 WHQ41_RS04625 WP_002853046.1 880922..881224(-) (ctsT) [Campylobacter jejuni strain Z1323CCJ0058]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |