Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | P3U72_RS06500 | Genome accession | NZ_CP120181 |
| Coordinates | 1295228..1295461 (+) | Length | 77 a.a. |
| NCBI ID | WP_239454554.1 | Uniprot ID | - |
| Organism | Mammaliicoccus sciuri strain Dog015 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1290228..1300461
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P3U72_RS06460 (P3U72_06460) | yqeH | 1290337..1291437 (+) | 1101 | WP_049318740.1 | ribosome biogenesis GTPase YqeH | - |
| P3U72_RS06465 (P3U72_06465) | aroE | 1291450..1292268 (+) | 819 | WP_058611649.1 | shikimate dehydrogenase | - |
| P3U72_RS06470 (P3U72_06470) | yhbY | 1292262..1292552 (+) | 291 | WP_049318742.1 | ribosome assembly RNA-binding protein YhbY | - |
| P3U72_RS06475 (P3U72_06475) | nadD | 1292569..1293129 (+) | 561 | WP_176698811.1 | nicotinate (nicotinamide) nucleotide adenylyltransferase | - |
| P3U72_RS06480 (P3U72_06480) | yqeK | 1293119..1293691 (+) | 573 | WP_058611647.1 | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK | - |
| P3U72_RS06485 (P3U72_06485) | rsfS | 1293704..1294057 (+) | 354 | WP_048539678.1 | ribosome silencing factor | - |
| P3U72_RS06490 (P3U72_06490) | - | 1294057..1294773 (+) | 717 | WP_058611646.1 | class I SAM-dependent DNA methyltransferase | - |
| P3U72_RS06495 (P3U72_06495) | - | 1294816..1295235 (+) | 420 | WP_323707730.1 | hypothetical protein | - |
| P3U72_RS06500 (P3U72_06500) | comEA/comE1 | 1295228..1295461 (+) | 234 | WP_239454554.1 | ComEA family DNA-binding protein | Machinery gene |
| P3U72_RS06505 (P3U72_06505) | - | 1295522..1295977 (+) | 456 | WP_204200952.1 | ComE operon protein 2 | - |
| P3U72_RS06510 (P3U72_06510) | - | 1296143..1298305 (+) | 2163 | WP_232345943.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| P3U72_RS06515 (P3U72_06515) | - | 1298341..1298478 (-) | 138 | WP_075577996.1 | YqzM family protein | - |
| P3U72_RS06520 (P3U72_06520) | holA | 1298570..1299544 (+) | 975 | WP_232191231.1 | DNA polymerase III subunit delta | - |
| P3U72_RS06525 (P3U72_06525) | rpsT | 1299618..1299869 (-) | 252 | WP_025904213.1 | 30S ribosomal protein S20 | - |
Sequence
Protein
Download Length: 77 a.a. Molecular weight: 8470.51 Da Isoelectric Point: 4.7571
>NTDB_id=804280 P3U72_RS06500 WP_239454554.1 1295228..1295461(+) (comEA/comE1) [Mammaliicoccus sciuri strain Dog015]
MPSVNTNQSTNDKVEVNINTGDKSEIEKLPGIGPSKADAILQYRETNGEFKTVDDLKKVKGFGDKTVESLKDFIVLN
MPSVNTNQSTNDKVEVNINTGDKSEIEKLPGIGPSKADAILQYRETNGEFKTVDDLKKVKGFGDKTVESLKDFIVLN
Nucleotide
Download Length: 234 bp
>NTDB_id=804280 P3U72_RS06500 WP_239454554.1 1295228..1295461(+) (comEA/comE1) [Mammaliicoccus sciuri strain Dog015]
GTGCCTAGTGTTAATACAAACCAATCTACAAATGATAAAGTAGAAGTCAATATTAATACGGGAGATAAATCGGAAATTGA
AAAGTTACCCGGTATCGGTCCGAGTAAAGCAGATGCCATTCTTCAATATAGAGAAACAAACGGAGAATTTAAAACTGTGG
ATGATTTGAAGAAAGTTAAAGGATTTGGAGATAAAACAGTCGAAAGTTTAAAAGACTTTATCGTTTTAAATTGA
GTGCCTAGTGTTAATACAAACCAATCTACAAATGATAAAGTAGAAGTCAATATTAATACGGGAGATAAATCGGAAATTGA
AAAGTTACCCGGTATCGGTCCGAGTAAAGCAGATGCCATTCTTCAATATAGAGAAACAAACGGAGAATTTAAAACTGTGG
ATGATTTGAAGAAAGTTAAAGGATTTGGAGATAAAACAGTCGAAAGTTTAAAAGACTTTATCGTTTTAAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.