Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR2 | Type | Regulator |
| Locus tag | I6L84_RS00320 | Genome accession | NZ_CP077224 |
| Coordinates | 65571..66053 (+) | Length | 160 a.a. |
| NCBI ID | WP_045772576.1 | Uniprot ID | A0A0F3HQT1 |
| Organism | Streptococcus gordonii strain FDAARGOS 1454 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 49106..74275 | 65571..66053 | within | 0 |
Gene organization within MGE regions
Location: 49106..74275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L84_RS00220 (I6L84_00220) | htrA | 49106..50299 (-) | 1194 | WP_060553296.1 | S1C family serine protease | Regulator |
| I6L84_RS00225 (I6L84_00225) | rlmH | 50493..50972 (+) | 480 | WP_060553297.1 | 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH | - |
| I6L84_RS00235 (I6L84_00235) | comC/comC2 | 51259..51411 (+) | 153 | WP_008808033.1 | bacteriocin | Regulator |
| I6L84_RS00240 (I6L84_00240) | comD/comD2 | 51427..52785 (+) | 1359 | WP_060553298.1 | competence system sensor histidine kinase ComD | Regulator |
| I6L84_RS00245 (I6L84_00245) | comE/comE2 | 52782..53549 (+) | 768 | WP_008808031.1 | competence system response regulator transcription factor ComE | Regulator |
| I6L84_RS00260 (I6L84_00260) | ychF | 53871..54986 (+) | 1116 | WP_008808030.1 | redox-regulated ATPase YchF | - |
| I6L84_RS00265 (I6L84_00265) | pth | 55060..55629 (+) | 570 | WP_060553299.1 | aminoacyl-tRNA hydrolase | - |
| I6L84_RS00270 (I6L84_00270) | mfd | 55622..59125 (+) | 3504 | WP_111705915.1 | transcription-repair coupling factor | - |
| I6L84_RS00275 (I6L84_00275) | - | 59191..59457 (+) | 267 | WP_012131074.1 | RNA-binding S4 domain-containing protein | - |
| I6L84_RS00280 (I6L84_00280) | - | 59450..59818 (+) | 369 | WP_012131073.1 | septum formation initiator family protein | - |
| I6L84_RS00285 (I6L84_00285) | - | 59821..59940 (+) | 120 | WP_037622626.1 | SP_0009 family protein | - |
| I6L84_RS00290 (I6L84_00290) | - | 59940..61220 (+) | 1281 | WP_045772579.1 | serine hydrolase | - |
| I6L84_RS00295 (I6L84_00295) | tilS | 61217..62494 (+) | 1278 | WP_060553300.1 | tRNA lysidine(34) synthetase TilS | - |
| I6L84_RS00300 (I6L84_00300) | hpt | 62499..63041 (+) | 543 | WP_060553301.1 | hypoxanthine phosphoribosyltransferase | - |
| I6L84_RS00305 (I6L84_00305) | ftsH | 63060..65042 (+) | 1983 | WP_060553302.1 | ATP-dependent zinc metalloprotease FtsH | - |
| I6L84_RS00320 (I6L84_00320) | comR/comR2 | 65571..66053 (+) | 483 | WP_045772576.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| I6L84_RS00430 (I6L84_00430) | mreC | 72958..73773 (+) | 816 | WP_060554277.1 | rod shape-determining protein MreC | - |
| I6L84_RS00435 (I6L84_00435) | mreD | 73775..74275 (+) | 501 | WP_045773633.1 | rod shape-determining protein MreD | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 19931.87 Da Isoelectric Point: 9.4703
>NTDB_id=579992 I6L84_RS00320 WP_045772576.1 65571..66053(+) (comR/comR2) [Streptococcus gordonii strain FDAARGOS 1454]
MKFEDVYKQVEGIVKRCYKDYYLHLWEYADWRQEGMLVLYELLKSHPNLLEDHPRLYRYFKTKFRNRIHDLIRRQESQKR
KLDRQPYEEVSEIGHRLRMKELYLDELVAFRSAMAEYRSQLSPEESKQYERLMADERFKGRKAMLKDLSYHLRDFNPRLD
MKFEDVYKQVEGIVKRCYKDYYLHLWEYADWRQEGMLVLYELLKSHPNLLEDHPRLYRYFKTKFRNRIHDLIRRQESQKR
KLDRQPYEEVSEIGHRLRMKELYLDELVAFRSAMAEYRSQLSPEESKQYERLMADERFKGRKAMLKDLSYHLRDFNPRLD
Nucleotide
Download Length: 483 bp
>NTDB_id=579992 I6L84_RS00320 WP_045772576.1 65571..66053(+) (comR/comR2) [Streptococcus gordonii strain FDAARGOS 1454]
ATGAAGTTTGAGGACGTATACAAACAAGTTGAAGGGATAGTCAAGCGCTGTTATAAAGATTATTATCTGCACTTATGGGA
GTATGCAGATTGGAGGCAGGAAGGAATGTTGGTGTTGTACGAATTATTAAAAAGTCATCCCAACCTACTGGAAGATCATC
CACGCCTGTACCGTTACTTCAAGACCAAGTTTCGGAACAGAATTCATGATTTGATTCGTCGCCAAGAGAGTCAAAAGCGG
AAATTGGACAGGCAACCCTATGAAGAGGTCAGCGAGATAGGTCATCGTTTAAGAATGAAAGAGCTGTATCTGGATGAATT
GGTAGCCTTTAGAAGTGCAATGGCAGAGTATAGAAGTCAGCTCAGTCCAGAAGAATCAAAACAATATGAGCGTCTGATGG
CAGATGAAAGGTTCAAAGGACGTAAGGCAATGCTCAAAGATTTGTCCTACCACTTAAGGGATTTCAATCCCCGTTTAGAT
TAA
ATGAAGTTTGAGGACGTATACAAACAAGTTGAAGGGATAGTCAAGCGCTGTTATAAAGATTATTATCTGCACTTATGGGA
GTATGCAGATTGGAGGCAGGAAGGAATGTTGGTGTTGTACGAATTATTAAAAAGTCATCCCAACCTACTGGAAGATCATC
CACGCCTGTACCGTTACTTCAAGACCAAGTTTCGGAACAGAATTCATGATTTGATTCGTCGCCAAGAGAGTCAAAAGCGG
AAATTGGACAGGCAACCCTATGAAGAGGTCAGCGAGATAGGTCATCGTTTAAGAATGAAAGAGCTGTATCTGGATGAATT
GGTAGCCTTTAGAAGTGCAATGGCAGAGTATAGAAGTCAGCTCAGTCCAGAAGAATCAAAACAATATGAGCGTCTGATGG
CAGATGAAAGGTTCAAAGGACGTAAGGCAATGCTCAAAGATTTGTCCTACCACTTAAGGGATTTCAATCCCCGTTTAGAT
TAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.