Detailed information NTG0458123

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: SA190iCDA_RS05885
• Genome accession: NZ_CP056087
• Coordinates: 1300672..1301097 (+)
• Length: 141 a.a.
• NCBI ID: WP_083329721.1
• Uniprot ID: -
• Organism: Pseudomonas argentinensis strain SA190
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1295672..1306097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SA190iCDA_RS05860	yacG	1295709..1295909 (-)	201	WP_070884463.1	DNA gyrase inhibitor YacG	-
SA190iCDA_RS05865	coaE	1295906..1296514 (-)	609	WP_070884681.1	dephospho-CoA kinase	-
SA190iCDA_RS05870	pilD	1296623..1297495 (-)	873	WP_139159445.1	prepilin peptidase	Machinery gene
SA190iCDA_RS05875	pilC	1297499..1298722 (-)	1224	WP_070884462.1	type II secretion system F family protein	Machinery gene
SA190iCDA_RS05880	pilB	1298725..1300428 (-)	1704	WP_070884461.1	type IV-A pilus assembly ATPase PilB	Machinery gene
SA190iCDA_RS05885	pilA2	1300672..1301097 (+)	426	WP_083329721.1	pilin	Machinery gene
SA190iCDA_RS05890	-	1301159..1303099 (+)	1941	WP_205881589.1	tetratricopeptide repeat protein	-
SA190iCDA_RS05895	-	1303144..1303995 (+)	852	WP_070884460.1	glycosyltransferase family 2 protein	-
SA190iCDA_RS05900	-	1304003..1304236 (+)	234	WP_070884459.1	helix-turn-helix domain-containing protein	-
SA190iCDA_RS05905	-	1304239..1305222 (+)	984	WP_236101044.1	lipopolysaccharide biosynthesis protein	-
SA190iCDA_RS23340	-	1305252..1305503 (+)	252	WP_419203829.1	polysaccharide biosynthesis C-terminal domain-containing protein	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 14636.93 Da
• Isoelectric Point: 9.8723

>NTDB_id=458123 SA190iCDA_RS05885 WP_083329721.1 1300672..1301097(+) (pilA2) [Pseudomonas argentinensis strain SA190]
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTTRTKVSEGLTLASAARTAVSEHRLSMNAWPATSAAAGYTSPNTKYV
NNITIGSGVITIQYKAAAGVAANSTLVLSPISATGGAIDWKCKPGTTTAVEAKYLPSNCRT

Nucleotide

• Length: 426 bp

>NTDB_id=458123 SA190iCDA_RS05885 WP_083329721.1 1300672..1301097(+) (pilA2) [Pseudomonas argentinensis strain SA190]
ATGAAAGCTCAAAAAGGTTTTACTCTCATCGAGCTGATGATCGTGGTTGCGATCATTGGGATCCTCGCCGCCATCGCACT
GCCTGCTTATCAGGATTACACCACTCGGACCAAAGTTTCTGAAGGGTTAACGCTGGCCTCGGCTGCGCGTACTGCTGTTT
CTGAGCATCGTCTTTCGATGAATGCATGGCCGGCAACCAGTGCTGCCGCTGGTTACACCAGCCCCAATACTAAATATGTA
AATAATATCACCATCGGTAGCGGTGTAATTACTATTCAGTATAAGGCCGCAGCAGGCGTGGCGGCTAACTCCACGCTTGT
TCTTTCTCCGATTTCTGCGACCGGTGGCGCAATCGATTGGAAGTGTAAGCCTGGCACCACTACTGCCGTAGAAGCCAAGT
ATCTGCCTTCTAACTGCCGCACTTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-140)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	59.712	98.582	0.589
pilA2	Legionella pneumophila strain ERS1305867	58.993	98.582	0.582
pilA	Ralstonia pseudosolanacearum GMI1000	45.455	100	0.532
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	38.298	100	0.511
comP	Acinetobacter baylyi ADP1	45.806	100	0.504
pilE	Neisseria gonorrhoeae strain FA1090	43.949	100	0.489
pilE	Neisseria gonorrhoeae MS11	42.405	100	0.475
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.177	100	0.44
pilA/pilA1	Eikenella corrodens VA1	41.333	100	0.44
pilA	Vibrio cholerae C6706	39.333	100	0.418
pilA	Vibrio cholerae strain A1552	39.333	100	0.418
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	39.333	100	0.418
pilA	Vibrio campbellii strain DS40M4	36.424	100	0.39
pilA	Acinetobacter baumannii strain A118	37.671	100	0.39
pilA/pilAII	Pseudomonas stutzeri DSM 10701	37.143	99.291	0.369
pilA	Pseudomonas aeruginosa PAK	33.333	100	0.362
pilA	Haemophilus influenzae 86-028NP	35.915	100	0.362