Detailed information NTG0379655

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: SMN_RS16305
• Genome accession: NZ_CP042966
• Coordinates: 3139392..3139610 (-)
• Length: 72 a.a.
• NCBI ID: WP_148512175.1
• Uniprot ID: -
• Organism: Sulfurospirillum multivorans strain N
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3134392..3144610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMN_RS16305	Cj0011c	3139392..3139610 (-)	219	WP_148512175.1	helix-hairpin-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 72 a.a.
• Molecular weight: 7923.24 Da
• Isoelectric Point: 9.6580

>NTDB_id=379655 SMN_RS16305 WP_148512175.1 3139392..3139610(-) (Cj0011c) [Sulfurospirillum multivorans strain N]
MFLVVSLWAKVDINSANVEELSSLKGIGEKKAQAIVDYRKVNAKFKTIDDLTQVKGIGSKIVEALKSETEVK

Nucleotide

• Length: 219 bp

>NTDB_id=379655 SMN_RS16305 WP_148512175.1 3139392..3139610(-) (Cj0011c) [Sulfurospirillum multivorans strain N]
TTGTTTTTAGTAGTTTCTTTATGGGCAAAAGTAGATATCAATAGTGCAAATGTAGAAGAATTAAGTTCTTTAAAAGGGAT
TGGTGAAAAGAAGGCACAAGCTATTGTTGATTATCGTAAAGTGAATGCGAAATTTAAAACAATAGATGATTTAACACAGG
TTAAAGGAATTGGTTCTAAAATTGTTGAAGCTCTTAAGTCAGAAACTGAAGTTAAGTAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (10-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50.725	95.833	0.486
comEA	Vibrio cholerae strain A1552	66.038	73.611	0.486
comEA	Vibrio cholerae C6706	66.038	73.611	0.486
comEA	Acinetobacter baumannii D1279779	56.667	83.333	0.472
comEA	Acinetobacter baumannii strain A118	55	83.333	0.458
comEA	Lactococcus lactis subsp. cremoris KW2	50.794	87.5	0.444
comEA	Bacillus subtilis subsp. subtilis str. 168	50	88.889	0.444
comEA	Acinetobacter baylyi ADP1	59.259	75	0.444
comEA	Vibrio parahaemolyticus RIMD 2210633	60.377	73.611	0.444
comE	Neisseria gonorrhoeae MS11	45.07	98.611	0.444
comE	Neisseria gonorrhoeae MS11	45.07	98.611	0.444
comE	Neisseria gonorrhoeae MS11	45.07	98.611	0.444
comE	Neisseria gonorrhoeae MS11	45.07	98.611	0.444
comEA/celA/cilE	Streptococcus pneumoniae D39	50	86.111	0.431
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50	86.111	0.431
comEA/celA/cilE	Streptococcus pneumoniae R6	50	86.111	0.431
comEA	Staphylococcus aureus N315	52.542	81.944	0.431
comEA	Staphylococcus aureus MW2	52.542	81.944	0.431
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	52.632	79.167	0.417
comEA/celA/cilE	Streptococcus mitis NCTC 12261	52.632	79.167	0.417
comEA	Vibrio campbellii strain DS40M4	56.604	73.611	0.417
comEA	Latilactobacillus sakei subsp. sakei 23K	50	83.333	0.417
comEA/celA/cilE	Streptococcus mitis SK321	50.877	79.167	0.403
comEA/comE1	Glaesserella parasuis strain SC1401	51.852	75	0.389