Detailed information NTG0223621

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: CHELV3228_RS06555
• Genome accession: NZ_CP020478
• Coordinates: 1230576..1230815 (-)
• Length: 79 a.a.
• NCBI ID: WP_082200224.1
• Uniprot ID: A0AAX2UJ31
• Organism: Campylobacter helveticus strain ATCC 51209
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1225576..1235815

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHELV3228_RS06545 (CHELV3228_1287)	-	1226774..1227517 (+)	744	WP_082200222.1	efflux RND transporter periplasmic adaptor subunit	-
CHELV3228_RS06550 (CHELV3228_1288)	-	1227519..1230527 (+)	3009	WP_082200223.1	efflux RND transporter permease subunit	-
CHELV3228_RS06555 (CHELV3228_1289)	Cj0011c	1230576..1230815 (-)	240	WP_082200224.1	DUF655 domain-containing protein	Machinery gene
CHELV3228_RS06560 (CHELV3228_1290)	-	1230886..1231377 (-)	492	WP_082200225.1	histidine phosphatase family protein	-
CHELV3228_RS06565 (CHELV3228_1291)	-	1231377..1231910 (-)	534	WP_082200771.1	rhomboid family intramembrane serine protease	-
CHELV3228_RS06570 (CHELV3228_1292)	-	1232003..1232413 (+)	411	WP_082200226.1	PepSY-like domain-containing protein	-
CHELV3228_RS06575 (CHELV3228_1293)	-	1232410..1233093 (-)	684	WP_082200227.1	3-methyladenine DNA glycosylase	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8826.39 Da
• Isoelectric Point: 8.5317

>NTDB_id=223621 CHELV3228_RS06555 WP_082200224.1 1230576..1230815(-) (Cj0011c) [Campylobacter helveticus strain ATCC 51209]
MKKIVFLMFALASFLFAAVNLNTATLEELKSLKGIGATKAQAILDYRKEQNFTSIEELKKVKGIGDKTFEEIKDSIVVE

Nucleotide

• Length: 240 bp

>NTDB_id=223621 CHELV3228_RS06555 WP_082200224.1 1230576..1230815(-) (Cj0011c) [Campylobacter helveticus strain ATCC 51209]
ATGAAGAAAATAGTTTTCTTAATGTTTGCTTTGGCGAGTTTCTTATTTGCTGCGGTCAATTTAAATACCGCTACACTTGA
AGAGTTGAAAAGTCTAAAAGGTATAGGAGCAACTAAGGCTCAAGCGATTTTAGATTATAGAAAAGAGCAAAATTTCACAA
GCATAGAGGAACTTAAAAAAGTTAAGGGTATCGGTGATAAAACCTTTGAAGAGATAAAAGATTCGATTGTTGTGGAATAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	72.152	100	0.722
comEA	Bacillus subtilis subsp. subtilis str. 168	57.143	79.747	0.456
comE	Neisseria gonorrhoeae MS11	44.444	100	0.456
comE	Neisseria gonorrhoeae MS11	44.444	100	0.456
comE	Neisseria gonorrhoeae MS11	44.444	100	0.456
comE	Neisseria gonorrhoeae MS11	44.444	100	0.456
comEA	Lactococcus lactis subsp. cremoris KW2	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae Rx1	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae D39	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus pneumoniae R6	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus mitis NCTC 12261	54.839	78.481	0.43
comEA/celA/cilE	Streptococcus mitis SK321	53.226	78.481	0.418
comEA/comE1	Glaesserella parasuis strain SC1401	52.381	79.747	0.418
comEA	Legionella pneumophila strain ERS1305867	48.485	83.544	0.405
comEA	Legionella pneumophila str. Paris	48.485	83.544	0.405
comE1/comEA	Haemophilus influenzae Rd KW20	52.459	77.215	0.405
comEA	Staphylococcus aureus MW2	55.357	70.886	0.392
comEA	Staphylococcus aureus N315	55.357	70.886	0.392
comEA	Vibrio cholerae C6706	59.615	65.823	0.392
comEA	Vibrio cholerae strain A1552	59.615	65.823	0.392
comEA	Latilactobacillus sakei subsp. sakei 23K	49.206	79.747	0.392
comEA	Vibrio parahaemolyticus RIMD 2210633	48.387	78.481	0.38
comEA	Acinetobacter baumannii D1279779	46.032	79.747	0.367
comEA	Streptococcus thermophilus LMD-9	47.541	77.215	0.367