Detailed information NTG0020088

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SSU05_0987
• Genome accession: CP000407
• Coordinates: 965671..965970 (-)
• Length: 99 a.a.
• NCBI ID: ABP89953.1
• Uniprot ID: -
• Organism: Streptococcus suis 05ZYH33
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 960671..970970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSU05_0982	-	961446..961631 (-)	186	ABP89948.1	hypothetical protein	-
SSU05_0983	-	961818..962183 (-)	366	ABP89949.1	Ribosomal protein L7/L12	-
SSU05_0984	-	962249..962779 (-)	531	ABP89950.1	Ribosomal protein L10	-
SSU05_0985	-	963320..965461 (-)	2142	ABP89951.1	DNA topoisomerase I	-
SSU05_0986	dprA/cilB/dalA	965515..965652 (-)	138	ABP89952.1	Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake	Machinery gene
SSU05_0987	dprA	965671..965970 (-)	300	ABP89953.1	Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake	Machinery gene
SSU05_0988	-	965967..966443 (-)	477	ABP89954.1	Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake	-
SSU05_0989	-	966415..966972 (-)	558	ABP89955.1	Acetyltransferase (isoleucine patch superfamily)	-
SSU05_0990	-	966983..967243 (-)	261	ABP89956.1	Uncharacterized protein conserved in bacteria	-
SSU05_0991	-	967308..967673 (+)	366	ABP89957.1	Rhodanese-related sulfurtransferase	-
SSU05_0992	-	967670..969328 (+)	1659	ABP89958.1	Uncharacterized NAD(FAD)-dependent dehydrogenase	-
SSU05_0993	-	969436..969987 (+)	552	ABP89959.1	hypothetical protein	-
SSU05_0994	-	969977..970627 (+)	651	ABP89960.1	Predicted membrane protein	-

Sequence

Protein

• Length: 99 a.a.
• Molecular weight: 10758.47 Da
• Isoelectric Point: 8.9200

>NTDB_id=20088 SSU05_0987 ABP89953.1 965671..965970(-) (dprA) [Streptococcus suis 05ZYH33]
MSNRFVIVSGLARGIDTAAHIASLKNGGQTIAVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRI
IAGLVEGLVVCEAKMRLAA

Nucleotide

• Length: 300 bp

>NTDB_id=20088 SSU05_0987 ABP89953.1 965671..965970(-) (dprA) [Streptococcus suis 05ZYH33]
TTGAGCAATCGTTTTGTCATTGTTAGTGGTTTGGCAAGAGGAATTGATACAGCTGCCCACATCGCCAGTTTGAAAAATGG
AGGCCAAACCATTGCTGTAATCGGAACAGGTTTAGATAATATTTATCCAAAAGAAAATAAAGATTTGCAGACCTATATTG
GAAAACACCATTTGGTGCTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTTCCAGAACGCAATCGCATT
ATAGCTGGTTTGGTGGAAGGATTGGTAGTCTGCGAGGCAAAAATGCGTCTGGCAGCTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (3-96)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	75	96.97	0.727
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	71.875	96.97	0.697
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	71.875	96.97	0.697
dprA/cilB/dalA	Streptococcus pneumoniae D39	71.875	96.97	0.697
dprA/cilB/dalA	Streptococcus pneumoniae R6	71.875	96.97	0.697
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	71.875	96.97	0.697
dprA/cilB/dalA	Streptococcus mitis SK321	70.833	96.97	0.687
dprA	Lactococcus lactis subsp. cremoris KW2	62.5	96.97	0.606
dprA	Bacillus subtilis subsp. subtilis str. 168	51.087	92.929	0.475
dprA	Acinetobacter baumannii strain A118	49.462	93.939	0.465
dprA	Acinetobacter baumannii D1279779	49.462	93.939	0.465
dprA	Acinetobacter baylyi ADP1	48.387	93.939	0.455
dprA	Legionella pneumophila strain ERS1305867	48.889	90.909	0.444
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.833	96.97	0.444
dprA	Staphylococcus aureus N315	46.237	93.939	0.434
dprA	Staphylococcus aureus MW2	46.237	93.939	0.434
dprA	Neisseria meningitidis strain C311	48.315	89.899	0.434
dprA	Neisseria meningitidis MC58	48.315	89.899	0.434
dprA	Neisseria gonorrhoeae MS11	48.864	88.889	0.434
dprA	Neisseria gonorrhoeae strain FA1090	47.727	88.889	0.424
dprA	Thermus thermophilus HB27	45.161	93.939	0.424
dprA	Latilactobacillus sakei subsp. sakei 23K	46.067	89.899	0.414
dprA	Vibrio cholerae strain A1552	46.067	89.899	0.414
dprA	Haemophilus influenzae Rd KW20	44.444	90.909	0.404
dprA	Vibrio campbellii strain DS40M4	42.697	89.899	0.384
dprA	Glaesserella parasuis strain SC1401	37.5	96.97	0.364