Detailed information NTG0133091

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: Csca_RS27525
• Genome accession: NZ_CP009933
• Coordinates: 4029320..4029727 (-)
• Length: 135 a.a.
• NCBI ID: WP_242860941.1
• Uniprot ID: A0A0E3GRT0
• Organism: Clostridium scatologenes strain ATCC 25775
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4024320..4034727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Csca_RS17850 (CSCA_3727)	-	4025160..4027841 (+)	2682	WP_029159040.1	hypothetical protein	-
Csca_RS17855 (CSCA_3728)	-	4028115..4028477 (+)	363	WP_029159041.1	hypothetical protein	-
Csca_RS17860 (CSCA_3729)	-	4028733..4028927 (-)	195	WP_242860939.1	hypothetical protein	-
Csca_RS27520 (CSCA_3730)	-	4029058..4029225 (-)	168	WP_242860940.1	hypothetical protein	-
Csca_RS27525 (CSCA_3731)	dprA	4029320..4029727 (-)	408	WP_242860941.1	DNA-processing protein DprA	Machinery gene
Csca_RS27530 (CSCA_3732)	-	4029781..4030158 (-)	378	WP_242860942.1	helix-hairpin-helix domain-containing protein	-
Csca_RS17870 (CSCA_3733)	-	4030173..4031612 (-)	1440	WP_341384811.1	YifB family Mg chelatase-like AAA ATPase	-
Csca_RS17875 (CSCA_3734)	-	4031749..4032312 (-)	564	WP_029159042.1	transposase	-
Csca_RS17880 (CSCA_3735)	-	4032983..4033870 (-)	888	WP_029159043.1	Rpn family recombination-promoting nuclease/putative transposase	-
Csca_RS17885 (CSCA_3736)	-	4033962..4034267 (-)	306	WP_029159044.1	phage integrase N-terminal SAM-like domain-containing protein	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 14685.06 Da
• Isoelectric Point: 9.5369

>NTDB_id=133091 Csca_RS27525 WP_242860941.1 4029320..4029727(-) (dprA) [Clostridium scatologenes strain ATCC 25775]
MAKGIDGYSHTACINSGGYTIAFLGNGVDLVYPKEHIKLMEKIIENGAVISEYPPGTKPYPKNFPKRNRLIAAFSTKLLV
VEADENSGSLITAAFAKKYSREVLAVPNNIFFKEGKGCNKLILNGATLYMPATIN

Nucleotide

• Length: 408 bp

>NTDB_id=133091 Csca_RS27525 WP_242860941.1 4029320..4029727(-) (dprA) [Clostridium scatologenes strain ATCC 25775]
ATGGCAAAAGGTATAGATGGTTATTCTCATACAGCTTGTATAAACTCAGGAGGATATACTATTGCTTTTCTAGGTAATGG
TGTTGACTTAGTTTACCCTAAAGAACATATAAAACTTATGGAGAAAATTATTGAAAATGGAGCAGTAATTTCGGAATATC
CACCAGGAACAAAGCCCTATCCAAAAAACTTTCCTAAAAGAAATAGATTAATCGCAGCCTTCAGCACTAAACTTTTAGTA
GTAGAAGCTGATGAAAATAGCGGCTCTCTTATAACAGCAGCATTTGCTAAAAAATATAGTAGAGAAGTTTTGGCAGTACC
TAATAATATTTTTTTTAAAGAAGGTAAAGGATGTAATAAACTTATACTAAATGGAGCAACATTATATATGCCAGCAACAA
TTAATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (1-128)

3D structure

• AlphaFold DB: A0A0E3GRT0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	51.938	95.556	0.496
dprA	Neisseria gonorrhoeae MS11	51.562	94.815	0.489
dprA	Neisseria meningitidis MC58	51.562	94.815	0.489
dprA	Neisseria meningitidis strain C311	51.562	94.815	0.489
dprA	Glaesserella parasuis strain SC1401	50.388	95.556	0.481
dprA	Neisseria gonorrhoeae strain FA1090	50.781	94.815	0.481
dprA	Vibrio campbellii strain DS40M4	50	94.815	0.474
dprA	Vibrio cholerae strain A1552	49.219	94.815	0.467
dprA	Legionella pneumophila strain ERS1305867	46.875	94.815	0.444
dprA	Lactococcus lactis subsp. cremoris KW2	44.697	97.778	0.437
dprA	Acinetobacter baumannii strain A118	43.411	95.556	0.415
dprA	Acinetobacter baumannii D1279779	43.411	95.556	0.415
dprA/cilB/dalA	Streptococcus pneumoniae D39	43.75	94.815	0.415
dprA/cilB/dalA	Streptococcus mitis SK321	43.75	94.815	0.415
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	43.75	94.815	0.415
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	43.75	94.815	0.415
dprA/cilB/dalA	Streptococcus pneumoniae R6	43.75	94.815	0.415
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	43.75	94.815	0.415
dprA	Streptococcus mutans UA159	44.444	93.333	0.415
dprA	Bacillus subtilis subsp. subtilis str. 168	43.651	93.333	0.407
dprA	Thermus thermophilus HB27	42.857	93.333	0.4
dprA	Staphylococcus aureus N315	40.152	97.778	0.393
dprA	Staphylococcus aureus MW2	40.152	97.778	0.393
dprA	Acinetobacter baylyi ADP1	41.085	95.556	0.393
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.872	80.741	0.37
dprA	Latilactobacillus sakei subsp. sakei 23K	38.583	94.074	0.363