Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   CVOL_RS01560 Genome accession   NZ_CP007774
Coordinates   281882..283060 (+) Length   392 a.a.
NCBI ID   WP_039665145.1    Uniprot ID   A0AAE6CZZ9
Organism   Campylobacter volucris LMG 24379     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 276882..288060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVOL_RS01545 (CVOL_0310) cysC 277725..278309 (+) 585 WP_039665143.1 adenylyl-sulfate kinase -
  CVOL_RS08190 (CVOL_0311) - 278306..279811 (+) 1506 WP_052243148.1 hypothetical protein -
  CVOL_RS01555 (CVOL_0312) - 279840..281885 (+) 2046 WP_039665144.1 capsular polysaccharide export protein -
  CVOL_RS01560 (CVOL_0313) kpsS 281882..283060 (+) 1179 WP_039665145.1 capsular polysaccharide export protein Regulator
  CVOL_RS08125 (CVOL_0314) - 283057..284556 (-) 1500 WP_039665146.1 SGNH/GDSL hydrolase family protein -
  CVOL_RS01570 (CVOL_0315) - 284710..285846 (+) 1137 WP_039665147.1 hypothetical protein -
  CVOL_RS01575 (CVOL_0316) - 285858..287231 (+) 1374 WP_039665148.1 cytochrome P450 -
  CVOL_RS01580 (CVOL_0317) - 287228..287581 (+) 354 WP_039665149.1 hypothetical protein -

Sequence

Protein


Download         Length: 392 a.a.        Molecular weight: 46542.07 Da        Isoelectric Point: 10.1955

>NTDB_id=123250 CVOL_RS01560 WP_039665145.1 281882..283060(+) (kpsS) [Campylobacter volucris LMG 24379]
MNLGKKLKKFSGKNVLLLQGPVGSFFYKISKKIPDANVYKINFNGGDFFFYPFKSVNYRGSLENLENFYINFFKEKNIQI
IIMYNDCRKIHEIAIKVAKEMGIEIWIFEEGYIRPNFITFEKDGVNANSTLPRDKEFYLNHKKFDKEYKIKNFSSTFKNM
AFASFLYWFFAALFAWYFNNSLHHRSLKFFDFTPWLLSLYRKKKYKITEKPINEKIINLKQKYFLAILQVFNDTQLSHHY
KKTTEKFIEEVIISFANHARAKSYLVFKHHPMDRGYKDYTKLIENLSLKYNVEGRILYVHDLHLPMLLSNARGTIVINST
VGLSALYHGSSLKVMGKAFYDIEGLTYQKSLHTFWKECRAYKPDARLHAKFRNYVIYKTQINGNFFKNTSLD

Nucleotide


Download         Length: 1179 bp        

>NTDB_id=123250 CVOL_RS01560 WP_039665145.1 281882..283060(+) (kpsS) [Campylobacter volucris LMG 24379]
ATGAATTTAGGTAAAAAATTAAAAAAATTTTCTGGAAAAAATGTTTTATTACTTCAAGGACCTGTTGGAAGTTTTTTTTA
TAAAATTTCTAAAAAGATACCCGATGCTAATGTGTATAAAATCAATTTTAATGGCGGAGATTTCTTTTTTTATCCTTTTA
AAAGTGTAAATTATAGAGGTAGTTTAGAAAATTTAGAAAATTTTTATATTAATTTTTTTAAAGAAAAAAATATTCAAATT
ATTATCATGTATAATGATTGTCGTAAAATTCATGAAATAGCCATTAAAGTAGCAAAAGAAATGGGTATAGAAATTTGGAT
ATTTGAAGAAGGCTATATAAGACCTAATTTTATAACCTTTGAAAAAGATGGAGTAAATGCAAATTCTACCTTGCCAAGAG
ATAAAGAATTTTATTTAAATCATAAAAAATTTGACAAAGAATACAAAATAAAAAATTTTTCTAGCACTTTTAAAAATATG
GCTTTTGCTTCGTTTTTGTATTGGTTTTTTGCTGCTTTGTTTGCTTGGTATTTTAATAATTCTTTGCATCATAGATCGTT
AAAGTTTTTTGATTTTACTCCTTGGCTTTTGTCTTTATATAGAAAGAAAAAATACAAGATCACTGAAAAACCAATCAATG
AAAAAATCATTAATCTCAAACAAAAATATTTTTTAGCCATTTTACAAGTTTTTAATGACACACAATTGTCCCATCATTAT
AAAAAAACTACGGAAAAATTTATAGAAGAAGTGATTATTTCTTTTGCTAATCATGCTAGAGCAAAATCTTATTTAGTTTT
TAAACATCACCCTATGGATAGAGGCTATAAAGACTATACTAAATTGATAGAAAATTTAAGTTTAAAATACAATGTAGAAG
GTCGAATTTTATATGTGCATGATTTGCATTTACCTATGCTTTTAAGCAACGCTAGAGGCACTATAGTTATAAATAGCACG
GTAGGACTTTCAGCCTTGTATCATGGGAGTTCTTTAAAGGTCATGGGAAAAGCATTTTATGATATAGAAGGATTAACCTA
TCAAAAAAGTTTGCATACTTTTTGGAAAGAATGTAGAGCTTATAAACCTGATGCAAGATTGCATGCTAAATTTAGAAATT
ATGTCATTTATAAAACTCAAATAAATGGGAATTTTTTTAAAAATACTAGTTTAGATTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-386)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.785

100

0.633

Multiple sequence alignment