Detailed information NTG1140623

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: DQN67_RS09575
• Genome accession: NZ_LS483410
• Coordinates: 2102510..2102920 (-)
• Length: 136 a.a.
• NCBI ID: WP_011214168.1
• Uniprot ID: A0AAX2J0V3
• Organism: Legionella pneumophila strain NCTC11404
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2097510..2107920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN67_RS09560 (NCTC11404_01903)	letS	2097863..2100566 (+)	2704	Protein_1849	two-component system sensor histidine kinase LetS	-
DQN67_RS09565 (NCTC11404_01904)	-	2100663..2101907 (+)	1245	WP_027225146.1	6-phosphofructokinase	-
DQN67_RS09570 (NCTC11404_01905)	pilA2	2101904..2102317 (-)	414	WP_027225147.1	pilin	Machinery gene
DQN67_RS09575 (NCTC11404_01906)	pilA2	2102510..2102920 (-)	411	WP_011214168.1	pilin	Machinery gene
DQN67_RS09580 (NCTC11404_01907)	-	2103223..2103540 (+)	318	WP_027225148.1	BolA family protein	-
DQN67_RS09585 (NCTC11404_01908)	-	2103615..2105036 (+)	1422	WP_027225149.1	APC family permease	-
DQN67_RS09590 (NCTC11404_01909)	-	2105134..2106564 (-)	1431	WP_027225150.1	cellulase family glycosylhydrolase	-
DQN67_RS09595 (NCTC11404_01910)	kdsB	2106812..2107564 (-)	753	WP_027225151.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
DQN67_RS09600 (NCTC11404_01911)	-	2107561..2107740 (-)	180	WP_010947637.1	Trm112 family protein	-

Sequence

Protein

• Length: 136 a.a.
• Molecular weight: 13854.07 Da
• Isoelectric Point: 8.4715

>NTDB_id=1140623 DQN67_RS09575 WP_011214168.1 2102510..2102920(-) (pilA2) [Legionella pneumophila strain NCTC11404]
MRQKGFTLIELMIVVAIIGILAAIAIPAYQDYTIRARVTEGLTLADSAKLAVSETAITNNALPATQAATGYVSPAATPNV
ASIAIGANGVITITYTAAAGGGTIVMTPTLQANGDVTWTCTGGTLLAKYRPASCRP

Nucleotide

• Length: 411 bp

>NTDB_id=1140623 DQN67_RS09575 WP_011214168.1 2102510..2102920(-) (pilA2) [Legionella pneumophila strain NCTC11404]
ATGAGACAAAAGGGTTTTACTTTAATTGAATTGATGATAGTCGTAGCGATTATCGGTATTTTGGCAGCAATCGCTATACC
AGCCTATCAAGATTACACAATACGAGCTCGTGTTACTGAAGGTCTGACCTTGGCAGATTCTGCAAAACTTGCCGTGTCTG
AAACGGCTATTACAAACAACGCGTTACCAGCTACTCAGGCTGCAACGGGCTATGTGTCTCCTGCTGCTACGCCCAATGTA
GCATCAATTGCTATTGGTGCAAACGGTGTGATTACCATCACGTATACTGCTGCAGCAGGTGGAGGTACCATAGTTATGAC
CCCAACCTTACAAGCTAACGGTGATGTAACCTGGACTTGTACGGGTGGTACTTTGTTGGCTAAATATCGACCTGCCAGCT
GCAGACCATAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	100	100	1
pilA2	Legionella pneumophila strain ERS1305867	98.529	100	0.985
pilA	Ralstonia pseudosolanacearum GMI1000	49.689	100	0.588
comP	Acinetobacter baylyi ADP1	53.793	100	0.574
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	37.566	100	0.522
pilA/pilA1	Eikenella corrodens VA1	39.873	100	0.463
pilA	Haemophilus influenzae 86-028NP	40.816	100	0.441
pilE	Neisseria gonorrhoeae strain FA1090	36.943	100	0.426
pilA/pilAI	Pseudomonas stutzeri DSM 10701	42.963	99.265	0.426
pilA	Acinetobacter baumannii strain A118	39.726	100	0.426
pilA	Pseudomonas aeruginosa PAK	39.189	100	0.426
pilE	Neisseria gonorrhoeae MS11	37.179	100	0.426
pilA	Haemophilus influenzae Rd KW20	44.094	93.382	0.412
pilA	Vibrio cholerae C6706	38.462	100	0.404
pilA	Vibrio cholerae strain A1552	38.462	100	0.404
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	38.462	100	0.404
pilA/pilAII	Pseudomonas stutzeri DSM 10701	39.855	100	0.404
pilA	Glaesserella parasuis strain SC1401	37.5	100	0.375
pilA	Vibrio parahaemolyticus RIMD 2210633	38.462	95.588	0.368