Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | DQN67_RS09570 | Genome accession | NZ_LS483410 |
| Coordinates | 2101904..2102317 (-) | Length | 137 a.a. |
| NCBI ID | WP_027225147.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain NCTC11404 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2096904..2107317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN67_RS09560 (NCTC11404_01903) | letS | 2097863..2100566 (+) | 2704 | Protein_1849 | two-component system sensor histidine kinase LetS | - |
| DQN67_RS09565 (NCTC11404_01904) | - | 2100663..2101907 (+) | 1245 | WP_027225146.1 | 6-phosphofructokinase | - |
| DQN67_RS09570 (NCTC11404_01905) | pilA2 | 2101904..2102317 (-) | 414 | WP_027225147.1 | pilin | Machinery gene |
| DQN67_RS09575 (NCTC11404_01906) | pilA2 | 2102510..2102920 (-) | 411 | WP_011214168.1 | pilin | Machinery gene |
| DQN67_RS09580 (NCTC11404_01907) | - | 2103223..2103540 (+) | 318 | WP_027225148.1 | BolA family protein | - |
| DQN67_RS09585 (NCTC11404_01908) | - | 2103615..2105036 (+) | 1422 | WP_027225149.1 | APC family permease | - |
| DQN67_RS09590 (NCTC11404_01909) | - | 2105134..2106564 (-) | 1431 | WP_027225150.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14475.82 Da Isoelectric Point: 6.2016
>NTDB_id=1140622 DQN67_RS09570 WP_027225147.1 2101904..2102317(-) (pilA2) [Legionella pneumophila strain NCTC11404]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=1140622 DQN67_RS09570 WP_027225147.1 2101904..2102317(-) (pilA2) [Legionella pneumophila strain NCTC11404]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
73.723 |
100 |
0.737 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.993 |
100 |
0.73 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.012 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
46.207 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.184 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |