Detailed information NTG1139129

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: DQM54_RS08330
• Genome accession: NZ_LS483375
• Coordinates: 1685700..1686182 (-)
• Length: 160 a.a.
• NCBI ID: WP_045772576.1
• Uniprot ID: A0A0F3HQT1
• Organism: Streptococcus gordonii strain NCTC3165
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1680700..1691182

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM54_RS08330 (NCTC3165_01660)	comR/comR2	1685700..1686182 (-)	483	WP_045772576.1	sigma-70 family RNA polymerase sigma factor	Regulator
DQM54_RS08335 (NCTC3165_01661)	amiF	1686384..1687307 (-)	924	WP_012130756.1	ATP-binding cassette domain-containing protein	Regulator
DQM54_RS08340 (NCTC3165_01662)	amiE	1687318..1688385 (-)	1068	WP_008809622.1	ABC transporter ATP-binding protein	Regulator
DQM54_RS08345 (NCTC3165_01663)	amiD	1688394..1689320 (-)	927	WP_008809623.1	oligopeptide ABC transporter permease OppC	Regulator
DQM54_RS08350 (NCTC3165_01664)	amiC	1689320..1690816 (-)	1497	WP_008809624.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19931.87 Da
• Isoelectric Point: 9.4703

>NTDB_id=1139129 DQM54_RS08330 WP_045772576.1 1685700..1686182(-) (comR/comR2) [Streptococcus gordonii strain NCTC3165]
MKFEDVYKQVEGIVKRCYKDYYLHLWEYADWRQEGMLVLYELLKSHPNLLEDHPRLYRYFKTKFRNRIHDLIRRQESQKR
KLDRQPYEEVSEIGHRLRMKELYLDELVAFRSAMAEYRSQLSPEESKQYERLMADERFKGRKAMLKDLSYHLRDFNPRLD

Nucleotide

• Length: 483 bp

>NTDB_id=1139129 DQM54_RS08330 WP_045772576.1 1685700..1686182(-) (comR/comR2) [Streptococcus gordonii strain NCTC3165]
ATGAAGTTTGAGGACGTATACAAACAAGTTGAAGGGATAGTCAAGCGCTGTTATAAAGATTATTATCTGCACTTATGGGA
GTATGCAGATTGGAGGCAGGAAGGAATGTTGGTGTTGTACGAATTATTAAAAAGTCATCCCAACCTACTGGAAGATCATC
CACGCCTGTACCGTTACTTCAAGACCAAGTTTCGGAACAGAATTCATGATTTGATTCGTCGCCAAGAGAGTCAAAAGCGG
AAATTGGACAGGCAACCCTATGAAGAGGTCAGCGAGATAGGTCATCGTTTAAGAATGAAAGAGCTGTATCTGGATGAATT
GGTAGCTTTTAGAAGTGCAATGGCAGAGTATAGAAGTCAGCTCAGTCCAGAAGAATCAAAACAATATGAGCGCCTGATGG
CAGATGAAAGATTCAAAGGACGTAAGGCAATGCTCAAAGATTTGTCCTATCACTTAAGGGATTTCAATCCCCGTTTAGAT
TAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A0F3HQT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	97.5	100	0.975
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	97.5	100	0.975
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	50	97.5	0.488
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	49.359	97.5	0.481
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	49.359	97.5	0.481
comX/comX1	Streptococcus pneumoniae Rx1	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae D39	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae D39	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae R6	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae R6	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae TIGR4	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae Rx1	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae TIGR4	48.718	97.5	0.475
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	48.077	97.5	0.469
comX/sigX	Streptococcus suis P1/7	48.387	96.875	0.469
comX/sigX	Streptococcus suis D9	48.387	96.875	0.469
comX/sigX	Streptococcus suis isolate S10	48.387	96.875	0.469
comX/sigX	Streptococcus mutans UA159	47.436	97.5	0.463
comX	Streptococcus thermophilus LMG 18311	43.871	96.875	0.425
comX	Streptococcus thermophilus LMD-9	43.871	96.875	0.425
comX/sigX	Streptococcus salivarius strain HSISS4	43.226	96.875	0.419
comX	Streptococcus salivarius SK126	43.226	96.875	0.419
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.208	96.25	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.208	96.25	0.406
comX	Streptococcus sobrinus strain NIDR 6715-7	42.208	96.25	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.506	98.75	0.4
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	41.558	96.25	0.4
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	41.558	96.25	0.4
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	41.558	96.25	0.4
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	41.558	96.25	0.4